| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0863 |
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| Symbol | virB4-2 |
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| ID | 3932201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 770926 |
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| End bp | 773337 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637901018 |
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| Product | type IV secretion system ATPase VirB4 |
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| Protein accession | YP_506730 |
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| Protein GI | 88608419 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR00929] type IV secretion/conjugal transfer ATPase, VirB4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGATT TTGCCGTTTT TAAGAACTAT AAAGCTAAAG TTGCTTCCTC GGAGTATCAC
GCCAGAAATT TTGTACCCTA TAAGGATCAC TTAGATTCCA GTACCATTCT TCTGAAGGAT
AACTCCATGC TTAAGGTTAT AAGGCTGGTC GGTTACCCCT TCGAAACTGC CGATGATGAG
GACGTAGACA TTCACAAGGC ATTAAGAAAT CAGCTTTTTA AAAGTGTCTC TTCTGGTCAT
TTTGCTCTTA GTTTCCACTT AATCCGCAGA AGAGAAGGAA GTCAGGCTCG TGCTCTCTTT
TCTAACAAAA TACCCAATTA CTTTGCTGAC TATGTCAGAA AGAGATGGCG CCAGAAACAT
GGGAATAAAA GCTCTTTTGT GAATGAGCTA TACATAACAG TCGTGAGGCG TAATGACAAA
AAAGTCGAGC TCTTCAACGA TCTTTATAGA AAAGTAACTC GTAAGGACAC GAAAGAGGGT
CGTATTGCCG ATTTGAAAAT TGCCCACGAA GAATTAGAGG AAATGACAAA CAAGCTTTTG
GTAAGCTTGA GGAACAATAC GCCCCATCTT CTTGGGTTGA AAAAAGTTGG CAATGTTACA
TACTCCGAAG TTCTAGCTTT TCTCTCTGGG ATTGCCAATT GTGGTGTGGC GCAATCAGAT
TTTGTTCTTC CTTACGGACC ACTTGATGAG GCTCTCTGTG GTTGCAGGAT GTATTTTGGA
AGGAAATCGA TAGAGATAGT TACACCATCC AGAAGTGAGT ATGCTGGGAT TATAAGTCTG
AAGGAATATG GTCAGAATAC TTCAGCTGGA ATGCTCGACA ATTTTCTGCA AGTCCCATAT
GAACTTGTTA TCACGCAGAC ATTTCAGTTT GTGCACAGAC AGGTTGCAAT CAGTAAGATG
CAGGTTCAGC AGAGCCGAAT GTTACAAACT CAGGATAAAG CTATTTCGCA GGTTGCTGAA
ATAACTAGAG CTCTCGATGA TGCTATGAGC GGTCGAATTG CGTTTGGGCT GCACCATTTG
ACCATACTCT GTCGTGAAAA AACTGAAAAA GGACTTGAGA ATGCACTGTC GCTAGTCGAA
TCTGAGCTAA CAAATGCTGG TGTGTATGCT GTCCGCGAAA AGATCAATCT TGAACCTGCT
TTTTGGGCCC AGTTACCCGG AAATTTTGAT TATATAGTTA GAAAAGCTAC GATAAGTACA
CTAAATCTGG CGGGCTTTGC ATCACAGCAC AATTACCCAT TTGGGAAGAT GGAGGGTAAT
CACTGGGGGG ATGCAATCAC TGTTTTTGAT ACTACTTCGG GTACGCCATT TTACTTCAAT
TTCCACTGTA AAGATGTTGG GCACACGCTA ATAATTGGCC CGACTGGGGC AGGTAAAACT
GTCTTACTCA ACTTTTTATG TGCACAGAGT ATGAAGTTCA GGCCACGGAT GTTTTTTTTT
GATAAGGATA GGGGTGCTGA GATTTTTATT CGTGCGCTAG GTGGTATTTA CACAGTGATA
GAACCAAGGA GCAAGAGTTA CTTTAACCCT CTTCAGCTTG ATGATACACC GGAGAATAGA
ACCTTCTTGA CAGAGTGGTT GAAGATTCTA GCCTCTGTCA ATGGAGATAA GTTCACTGCG
GCGGATATTG CGACACTGAA TGATGCGGTG GCAGGTAATT TTAAGCTCGA CAAAGCAGAT
AGAACTCTGA GCAATCTTTC TGCGTTTTTT GGGTTGGAAG GTGACAATAG TTTGGCTACT
CGCCTATTAA TGTGGTATGG GAATGGTTCG CATGCAACGC TTTTTGATAA TCAGGAAGAT
TGTCTCGATT TTTCAAAGGC TAGTGTATTT GGTTTTGAAA TGGGACACCT CCTTAGAGAC
AGTGCGGCGC TTGCGCCTGT TTTGCAATAT TTGTTCCATA GAATAAGCAT CTCGTTGGAT
GGGTCCCCTT CCATGATTGT GTTAGATGAG GCTTGGGCCC TTATAGATAA TCCAGTTTTT
GCGCCCACAA TTAAGGATTG GCTCAAGGTT CTAAGGAAGC TAAATACGTT TGTTATATTC
GCTACCCAGA GTGTAGAGGA TGCAAGTAAG AGTGCGATAA GTGATACTTT AGTTCAGCAG
ACAGCGACGC AGATTTTTTT GCCAAACCTT AAAGCAACAG ATGTTTACAG ATCCGTGTTT
ATGCTTAGCG AGCGGGAGTA CATGCTTATC AAACACACAG ATCCAGCTAC ACGGTTTTTC
TTGATAAAAC AGGCTATGAG TGCTGTTATA GCGCGGATCA ATCTCAGTGG AATGGAAGAT
ATTATCTCAG TCTTATCTGG ACGCGCGGAT ACGGTACTAC TCCTGCACCG GATTATGGAA
GAGTATGGTG AAGAACCAGT AAAGTGGCTT CCAGTTTTTT ATGAAAAAGT GAAGGAGTTG
GATCAGCAAT GA
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| Protein sequence | MFDFAVFKNY KAKVASSEYH ARNFVPYKDH LDSSTILLKD NSMLKVIRLV GYPFETADDE
DVDIHKALRN QLFKSVSSGH FALSFHLIRR REGSQARALF SNKIPNYFAD YVRKRWRQKH
GNKSSFVNEL YITVVRRNDK KVELFNDLYR KVTRKDTKEG RIADLKIAHE ELEEMTNKLL
VSLRNNTPHL LGLKKVGNVT YSEVLAFLSG IANCGVAQSD FVLPYGPLDE ALCGCRMYFG
RKSIEIVTPS RSEYAGIISL KEYGQNTSAG MLDNFLQVPY ELVITQTFQF VHRQVAISKM
QVQQSRMLQT QDKAISQVAE ITRALDDAMS GRIAFGLHHL TILCREKTEK GLENALSLVE
SELTNAGVYA VREKINLEPA FWAQLPGNFD YIVRKATIST LNLAGFASQH NYPFGKMEGN
HWGDAITVFD TTSGTPFYFN FHCKDVGHTL IIGPTGAGKT VLLNFLCAQS MKFRPRMFFF
DKDRGAEIFI RALGGIYTVI EPRSKSYFNP LQLDDTPENR TFLTEWLKIL ASVNGDKFTA
ADIATLNDAV AGNFKLDKAD RTLSNLSAFF GLEGDNSLAT RLLMWYGNGS HATLFDNQED
CLDFSKASVF GFEMGHLLRD SAALAPVLQY LFHRISISLD GSPSMIVLDE AWALIDNPVF
APTIKDWLKV LRKLNTFVIF ATQSVEDASK SAISDTLVQQ TATQIFLPNL KATDVYRSVF
MLSEREYMLI KHTDPATRFF LIKQAMSAVI ARINLSGMED IISVLSGRAD TVLLLHRIME
EYGEEPVKWL PVFYEKVKEL DQQ
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