| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0861 |
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| Symbol | |
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| ID | 3931419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 765772 |
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| End bp | 768291 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637901016 |
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| Product | VirB6 family type IV secretion system protein |
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| Protein accession | YP_506728 |
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| Protein GI | 88607975 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTA AGGTCAGAAT CAGAGCTGGA GGGGTTGCTG TGCCCAACAA AGGTTTTGCA
CTTGTTTGTT TGTTGCTCCT TCTTTGTTTG TCTGGGTGTG CCGGAGACTG TATTTCCGGT
GCCAGCTCTA ATGATGTCAA AAAAGGTACT TTGCGAGTCT GTCCCAATCC AGGTGATGTA
GGTGATAGGA ATTGTCTGGA GTATATGGGT GTTGCTGAAG GAGAAGTACC TGATGCTAGG
ACTCACTGGG TAAATGTGGG TATCAACCTA GAAAAGGGTG ATATATTTGA ATATCAGATT
AAAAGGTCTG ATGATTATTC ACTTTGTTAT CCTCCCTGTC CTGATGATTG TTTGAACGAA
AATGGTGAGA ATCTTTGTGA TACTCCTAGT TGTAGGTGGG TGGATCTTGA GTTTCCAGGT
GGCAAAGCTG AGGTCGATCT CAATCTTCTT GAAGGTGATG AAGTTCTAAT AGGTTTGAGG
CCCGCGCTGG AATCCGGGTT GATTAGTAAT GATATTTGTG CGGGTAAAGA TGCGAGAATC
TACCCGGGAA ATTATCAGGA ATGTATGAAG CATAGAGGGG AACCCTATGG AGGTCTTTTT
GCGCCAGGGA TTAATCTGGT AGTTGATAAA AAGGGTGCTC TAGATAAGTT TAAGGTTGTC
TACAGCCTGA ATGGGGGTAT AGACCGATCG ATTGGCACAG TCGATTTGTG TAGAGCTGTA
GTTTTTGGAG AAAGTTTAGA TCGGTATAGC AAGGAAGTAG AAAATCTAAG TAAAAGAGTT
CCTGGAATCG CTCTTCATAG GTACTGTAAA GCGCTTATAG AGCAAACTGG TCAATTTATT
AAGCGCAATG AGGCCTTAGT CGAATTCGAG GGTAAAGATC TCGTTCTGCG GTGGCTTCAT
CTCTATTTGA AGGATGATAG TGGACAGTTG TCTTACTTGT GTTACGACGA TAAGGATATT
CCTGGGCTCT GTCGTGCCAG TAATGACGAT TATTTTTTTA ACCGTACAAC AGTTCCACTA
AATAAATTCT TTAGGGTGTC TTCAAGATCC TTCAAGTCAA TGCAGCTGCA ATTTAGTTCA
CTTGATGAAA CGGTTGCGCA AAATGGTATT TTTAAGCTCA AGGTAAGTAG GAAATGCGAT
ATTCCCGATT TTAAGGGAGT AAAAGTGTAC ATCTCCGAAG AAGATCCCAA CTTTGAACCC
TCAGTTCAGG GTGAAGGGGG TGCATTTTTA GTGCCAGACT CCACCAACAT AATAGATAGG
AAGGGATCTA TGTACGTGGG AATAGTAGAT CAACGAGGAG ATGGGAAGGC TGAAAGCCGG
GGTTACATAT CGCTACATTA TGTTCTTAAG CGGCAGAACG GTATAAAGCT TTTTAGTAAG
GCAACGAACA GTGTAAAGAG TAAGATAATA AGGATTTTGT ACGGCAAGAC AGTCGATGAA
TATGGCAGGT TCAGCGAGGG TGACGATGTT GCTGGCGCGG TAGGGGGTGT CTATAAAGCA
GTAGCAGGAA GTACGCTCAC AATCGCGGTG CAAGCTTCTA TCGTACTTTA CATCGTTATC
TACGGTTTAG CCTTCTTATT TGGCCTTGTT AGGACGCCCC AGGTTGATCT GGTAATCCTA
CTTGTGAAGC TTGGCATAAT CGCGGTTCTT TTTGGTCCCA ATAGTTGGAA ATTTTTCAAT
GAGAATTTGT TTCAACTTTT TGTAGAGGGT TCTGGGCAGT TAATTAATTA CTTTTCGGGC
AACATGAATG GTGTGGATTT TGCGTTTCTT GATAAAGTAC TTGCTCCTTT TAGCACACAA
GAGAATTGGC TCAGGATCTT TAGTTTTTTG TTTTCTGGTG GTTTAGGAAT CCTGTATTTC
TTGTTGATAA TCGTGGGCTT AATACAGATT TTTATGGCCA TGCTCAAGAT CATCGTTGCG
TACGTCATGT CGCTTGTTAT GGTGGCAATA CTTCTTTGTC TTGCACCAAT CTTTCTCTCC
ATGATTTTCT TTAAGAGGAC AAAATCCATT TTTGATAACT GGATAAAAAA CTTGGCACAA
GTAGCCGTGA CCCCCGTTAT CACGTTTGCT GCATTTGCAG TATTGGCAGA GGTTGGATTG
GGAATAATTT ATGCACTTTT TGATTTCCAG ATTTGTCCTA GATGTGTAAT TGAACCGGAT
TTTGCGCTAT TCAGATTCTG CCTACTTGCT GTGTATTTGC CAACTTCATA CGATTTCGGA
GGAATAATGG TTGCGCAAAA TGCAGGTGGG ATGCCAGTAG GCATAAGTTT AGTGGTGTCG
TTTATCGTGA TTAGTAACGC GGTTGTCGCC TTCACTTCAA GAGCTGCCAT TCTCTCTAGT
TCAATTTTTG GTGCGATTGC ATCTGACGCT ACGGTTCCTG CAGAGCAATT CATGGATAGT
ATGAAAGCAA TTGTAGGCCA AGATGCTCAA ACGCAATATC AAAAAGCGCA TATAAGACAC
ACCAAAGAGC TCGATCACGA AAAAGATGAG CCTGAGAAAC CACCAAAACG TAATAGATAG
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| Protein sequence | MLTKVRIRAG GVAVPNKGFA LVCLLLLLCL SGCAGDCISG ASSNDVKKGT LRVCPNPGDV
GDRNCLEYMG VAEGEVPDAR THWVNVGINL EKGDIFEYQI KRSDDYSLCY PPCPDDCLNE
NGENLCDTPS CRWVDLEFPG GKAEVDLNLL EGDEVLIGLR PALESGLISN DICAGKDARI
YPGNYQECMK HRGEPYGGLF APGINLVVDK KGALDKFKVV YSLNGGIDRS IGTVDLCRAV
VFGESLDRYS KEVENLSKRV PGIALHRYCK ALIEQTGQFI KRNEALVEFE GKDLVLRWLH
LYLKDDSGQL SYLCYDDKDI PGLCRASNDD YFFNRTTVPL NKFFRVSSRS FKSMQLQFSS
LDETVAQNGI FKLKVSRKCD IPDFKGVKVY ISEEDPNFEP SVQGEGGAFL VPDSTNIIDR
KGSMYVGIVD QRGDGKAESR GYISLHYVLK RQNGIKLFSK ATNSVKSKII RILYGKTVDE
YGRFSEGDDV AGAVGGVYKA VAGSTLTIAV QASIVLYIVI YGLAFLFGLV RTPQVDLVIL
LVKLGIIAVL FGPNSWKFFN ENLFQLFVEG SGQLINYFSG NMNGVDFAFL DKVLAPFSTQ
ENWLRIFSFL FSGGLGILYF LLIIVGLIQI FMAMLKIIVA YVMSLVMVAI LLCLAPIFLS
MIFFKRTKSI FDNWIKNLAQ VAVTPVITFA AFAVLAEVGL GIIYALFDFQ ICPRCVIEPD
FALFRFCLLA VYLPTSYDFG GIMVAQNAGG MPVGISLVVS FIVISNAVVA FTSRAAILSS
SIFGAIASDA TVPAEQFMDS MKAIVGQDAQ TQYQKAHIRH TKELDHEKDE PEKPPKRNR
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