| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0859 |
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| Symbol | |
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| ID | 3931769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 758873 |
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| End bp | 762322 |
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| Gene Length | 3450 bp |
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| Protein Length | 1149 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637901014 |
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| Product | VirB6 family type IV secretion system protein |
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| Protein accession | YP_506726 |
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| Protein GI | 88608766 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.488761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAGAC TGCCGAACCG GATAATGGAA TTCGTACCCA GAGTCAGGCA GGTGATGATG
AAAAAGATTA GGGTAGCGAA AGTGAGTAAT CGTATAGCAA GATACTGTCC AAGTGGTTTG
AAGCGTGTGC TTGTACTCAT GCTTGGACTG TTTTTACTGT CTGGCTGTGA AAAATGTGAA
AATGTGTGTC CAAGATGCAT AGCAGCAGAC GATTTTGGTA TACCTAAGTC AAGTGCTGCT
GCGTTAATTG AGTATGATAG CCCACTTCTT AAGTCAGATG CAGCACTGCT TGGTCTAGAG
GACAATACTT CAGGCAGACA ACTAATGCGC TGGGAGGATT CCGGTTATGT TACTTCGGGT
GAACCAATCA CTTTGAATGT CGAGGGGCGG TGGTTGTTTA TGCCTGCGCG TAGCGTACTC
CGTTTTTCTA GGGACGAAAT ACAAAAGGTT TTCCGTTGTG GGGATATTGA CTACGAGGCT
TTGAAGGAAG CTGATGAAGA ATTTAAAAAG AATTTCCCAA ACCAGTCCTG CACCTACTTA
GCGACACAAA TGACCGATAT TACAACAGGT TGCTTGATCA ATGGTGCAAA AATAGATCCT
AAATTCTCCC AGTCTGGATG TATATTAGAA AAGGGGTATG GATTATATCT ACTTTTTTAC
CGTCCTGGTG ACCCTAATCC TAATACTACT TTTTCCTCCA TTGCAACCCC TGCCTCTCCG
GCAATGCATA TTGGATATAC CGGTGATAGT ATCACCATAG AGTCGGTTTT TACAAGCGAT
TGCACGCGTT TAAACTTGGA GCCTGGCTGG AAAATCTACT ACAAACTTAT GGACGTGTTC
TACCAGAATA ACGTGGGTGG TTATTCTCTG GAATTTCGTA CAGGGGTGAT TGATCCAAAA
AATACTGCGA AGTTTTTTGA AAGTGTACGT TCCATGCTAC AGGATCTTCT TACCGGACAG
AACGAGGCAA TATACAAGGC CATTACGTCT AATAACGACT ATGTTTCATT AGTGAAGGCT
CTAATAGTTC TGATGATTGT TCTCACAGGT CTTAGATTTC TTATGGGAAT ATCTGAAAGT
CCGCCAAGTG AATTACTGAT AAAAGTTTTA AAAATGGCAA TTATTCTTCA GCTAATTTCT
CCGAGTAGCT GGGATTTTTT CTATAATAAT TTGTTCCGTT TGTTTATAGA TGGACTAAAC
GAAGTTATAG CAGTAGTGAA CTCTCATACT GGTGCTGGTT ACCAGCTAGA TCAACCTTTT
GCTTTCCTCG ATGATACCGT GAACATTTTG TTTAAGATGC TTGTTTCGAC AAAAGTCAAG
GCGATCATAC TTGCGTATCC ATTGGGAGTT TTTTGGTGGT TAATCCTTTT CTTTATACTG
GTGATCTACG TTGTCCTTGT TGCATATGCT TTTGTTGTTT ACCTAACCGC CCTTATTGGA
CTATCAGTGC TAATTGTCTT GATGCCGGTC CTATTTTTGG GAATGCTATT CGGACAGCTT
AAACATACTT TCGATAACTG GTTTACCCAG GCACTGAGTT TCTGTTTCCA AGCAATAATG
ATTTTTACTG TAGTTTCGCT GTTTTCAGCA ATGATAAAGG ACCAATTTTA CAGAAACACA
GGCTACACGA TCTGTTGCAA CAAGTTCTGG GTTTTTCCAT TTAATATTTC TGTTTACGCC
TGGACACCTG GACAGAAATT TATGCCACTC ACTATAACTC ACATGTGGGA GAGTAAACGC
GTTGAGTTTA CTGGTGGTGC AAAAGTGATT GATATACCAC CTTATTACAA AGAAAGGGGT
TGTAGATTTG TTGATTATCC ATTCTATGAT CCACAAATTA GTAATGCTAA TTGTGGGATT
GCTGGTTTTG CTGGAAAAGG AGCAGATTGG GAGCGGATAG AGAAGATAAG AGAATCTGAT
TCTGGCCTAC TTGATATGGC CGAGGTATTT GTGCTGTTGC TTCTTTCGGT GATTATGTTC
CACATGAGAG ATCTTTGTCA GTCTATAGGG GCGTCGCTTG TCGGTGCATC ACCGTTCCAA
GCTGTCATAG GTGGTGCTTA TGCTGCTCAG GATGGTATAG GTGGACTCTA CAGAGCTGGG
AAAATGGTTA TAGGTGCGCT TGCCGACAAG CTCCCTGTGC TTAGTGGAGT ACGTAACAGC
GCAGATGATA TAGCTTCTCT CAGAAGTCGT GTTGGTGAAA GTATTGCAGC CAAATTAAAC
GAGACAAACT TGGGTGAAGC CACAATGAAA GTACTCTCCA CTGTTGGTGA TGTCTCCAGC
GGTATAGTAA AAGGTACAGG TTATCTCTTA GGTGTGAATT CAGAGCTCAG TGATCACTAT
TATGAGAAAA AGGCCTTTAG GCAAATCAAC TATACACAGG CTCTTATGGG GTACCATCTT
GTATCGATTG TAGGTACCAG GGATTTAAGT GATTCACCAG GAATAAAAAT GCTTTTTGGT
GGTCTCAAAC ATATGTCGGA TAAGTATTTT GTTGGAGCAA AGGAGGAAAG TCTTTTTGGT
GGTTTACGTA AACTTTACGT CTGTGAACGG GAAAAAATTC ATGATTACTA TCTCGGCATT
CAACGTGAGA AATTACCAGA ATGTATGGAT GATATCAAAC GGAACGAAAA GCCAACTGCT
GATTTTTCTA GTTCTACTGA GGATGGTCTT TCGATAGATA AAAAATCAGA CGCTAATGGA
AATCTATCAC ATCATCCTAA TTCATTACCT CCTTCATATA GCGAGATCGA ATTCGAAAAC
ACAACTCCTG ATATTTCGTT GGAGCTGCCT GAATTTGTTA GTACTGGTGA AACGTCTCCA
GGGTTAACGC CTCAAACGGC TGTAGAAGAA GCACATCGTG ATTCCGTTGG AGAGGAAAGT
AGTGCTTTTG ATGTTTCAAG AGGGTCAAGT GAAGATATGA GTGCTGGTGA AACGTCTCCA
GAGTTAACGC CTCAAACGGC TGTAGAAGAA GCACATCGTA ATTCCGTTGG AGAGGAAAGT
AGTGCTTTTG ATGTTTCAAG AGGGTCAAGT GAAGATATGA GTGCTGGTGC AACGTCTCCA
GAGTTAACGC CTCAAACGGC TGTAGAAGAA GCACATCGTG ATTCCGTTGG AGAGGAAAGT
AGTGCTTTTG ATGTTTCAAG AGGGGTGACT AAAAATACTG CTACTGATGA AGCCGGTCTC
GAGTTAGCAT CTCATGGTAG AACAGAACAA GATACAGCTG AAGCTTCTAA CGCAGAAGAC
ACTGCTTCTG CGTTTTCTAA TGTCACTCAG GATGGTGGCG GTATTTTTGG CTCCCTTATA
GAGGGTGCTG TAAGCAAACA AGGTACATCT AAAGATCCTT CGCATAGTGT TACTTCAGCA
GAAGAGCAGG CTAAGAAGCC TACGAAAAAG CCTAAAGGGC GAAAATTGCC AGGCCAGTTT
GTTGAAACTG AGGAAAACTC CGAGGAATAA
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| Protein sequence | MKRLPNRIME FVPRVRQVMM KKIRVAKVSN RIARYCPSGL KRVLVLMLGL FLLSGCEKCE
NVCPRCIAAD DFGIPKSSAA ALIEYDSPLL KSDAALLGLE DNTSGRQLMR WEDSGYVTSG
EPITLNVEGR WLFMPARSVL RFSRDEIQKV FRCGDIDYEA LKEADEEFKK NFPNQSCTYL
ATQMTDITTG CLINGAKIDP KFSQSGCILE KGYGLYLLFY RPGDPNPNTT FSSIATPASP
AMHIGYTGDS ITIESVFTSD CTRLNLEPGW KIYYKLMDVF YQNNVGGYSL EFRTGVIDPK
NTAKFFESVR SMLQDLLTGQ NEAIYKAITS NNDYVSLVKA LIVLMIVLTG LRFLMGISES
PPSELLIKVL KMAIILQLIS PSSWDFFYNN LFRLFIDGLN EVIAVVNSHT GAGYQLDQPF
AFLDDTVNIL FKMLVSTKVK AIILAYPLGV FWWLILFFIL VIYVVLVAYA FVVYLTALIG
LSVLIVLMPV LFLGMLFGQL KHTFDNWFTQ ALSFCFQAIM IFTVVSLFSA MIKDQFYRNT
GYTICCNKFW VFPFNISVYA WTPGQKFMPL TITHMWESKR VEFTGGAKVI DIPPYYKERG
CRFVDYPFYD PQISNANCGI AGFAGKGADW ERIEKIRESD SGLLDMAEVF VLLLLSVIMF
HMRDLCQSIG ASLVGASPFQ AVIGGAYAAQ DGIGGLYRAG KMVIGALADK LPVLSGVRNS
ADDIASLRSR VGESIAAKLN ETNLGEATMK VLSTVGDVSS GIVKGTGYLL GVNSELSDHY
YEKKAFRQIN YTQALMGYHL VSIVGTRDLS DSPGIKMLFG GLKHMSDKYF VGAKEESLFG
GLRKLYVCER EKIHDYYLGI QREKLPECMD DIKRNEKPTA DFSSSTEDGL SIDKKSDANG
NLSHHPNSLP PSYSEIEFEN TTPDISLELP EFVSTGETSP GLTPQTAVEE AHRDSVGEES
SAFDVSRGSS EDMSAGETSP ELTPQTAVEE AHRNSVGEES SAFDVSRGSS EDMSAGATSP
ELTPQTAVEE AHRDSVGEES SAFDVSRGVT KNTATDEAGL ELASHGRTEQ DTAEASNAED
TASAFSNVTQ DGGGIFGSLI EGAVSKQGTS KDPSHSVTSA EEQAKKPTKK PKGRKLPGQF
VETEENSEE
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