Gene NSE_0840 details

Gene Information

• Locus tag: NSE_0840
• Symbol: rplM
• ID: 3932168
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: -
• Start bp: 742460
• End bp: 742918
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637900995
• Product: 50S ribosomal protein L13
• Protein accession: YP_506708
• Protein GI: 88608735
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.637892
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACGT TTTTTTTGAA GCAAGCGCAA ATAGAGAAGC AGTGGATCGT TGTAGATGCG 
ACGGATGCTG TTGTTGGGAG GCTTGCTGCC TTTGTTTCCA CTATCTTGCG TGGTAAAACT 
AAGCCCACAT ATACTCCACA CATGGATTGT GGGGATAATG TGATAGTTGT GAATGCCTCC 
AAGGTCAAAT TTTCTGGTTC CAAGATGTCC GATAAGGTGT ACTATAGGCA TACGGGATAT 
CCTGGTGGTA TTAAAAGTAC AACCCCAGCT AAAATACTTA GGGGGAAGAA ACCTTGTGAG 
GTTGTCAAGC TTGCTGTTAA GAGGATGCTG GATGATGGTC CGATGGCACG CAGAAGGCTT 
AAGAACCTTT ATGTTTACGC TGGTCCTGAG CACAGGCATG AGGCTCAGAA GCCGAGTATT 
GTGGAGTTTG CATCATTAAA TAGAAAAAAT AGAAGGTGA 

 

Protein sequence

MSTFFLKQAQ IEKQWIVVDA TDAVVGRLAA FVSTILRGKT KPTYTPHMDC GDNVIVVNAS 
KVKFSGSKMS DKVYYRHTGY PGGIKSTTPA KILRGKKPCE VVKLAVKRML DDGPMARRRL 
KNLYVYAGPE HRHEAQKPSI VEFASLNRKN RR