Gene NSE_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0829 
Symbol 
ID3931644 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp735399 
End bp737027 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content42% 
IMG OID637900985 
Productmetallo-beta-lactamase family protein 
Protein accessionYP_506699 
Protein GI88608757 
COG category[R] General function prediction only 
COG ID[COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily 
TIGRFAM ID[TIGR00649] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0228245 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGATA ATAATTTAAT ATTTTTGCCT CTTGGGGGTA CTGGTGAAAT AGGAATGAAT 
GTCACCTTGT ATGGATACAA GGGTCGGTGG ATCATGATCG ATTGTGGGGC AGGTTTTGCT
GACGCGGAAT TGCCTGGGAT AGACATCGTT GTTGCAGATA TCAGTTTCAT CGAAGAGCGC
AAGGATGACC TTTTAGCTAT AATTATCACT CATATTCACG AAGACCACTG TGGGGCACTT
CCGTATTTGT GGGATAGATT GGCTGTTCCT GTATATACTA CCCAGTTCAC TGCGAATTTC
CTGCTAAAAA AAATTGGCCG TGATAAGGTG CAATTTCCGA TTCATGTTGT GGAGCCGGGG
AAGTTGTTGC ATTTGGGAGA TTTTACGCTT GAATTTATTA ACATGACCCA TTCGGTACCC
GAAATGAATG CAATTGCAAT TCATACTGCC GATAAAGTGG TGATTCATAG TGGGGATTGG
AAAATAGACG ATGATCCCGT TGTTGGAAAG ACATGTGATT TTAAAAGACT TGAAGAACTC
TCGGAAAAGG GAGTTCTGGC AATGGTGTGT GATTCAACTA ATGTGTTTTC TCACGGGAGG
TCCGATTCTG AATCCTCATT GAGGGAGCCA CTGATGGAGG TTATTTCCAG TGCCAGTGGA
GCGTGTGTTG TGACGCTTTT TTCTTCGAAC ATTGCAAGAA TAGAGACTGT GACAAGGATA
GCAAATGAAT ACGGAAAGAC GGTTGTTGTT CTAGGGAGAT CTCTTCTTTC TGTAATTTCT
GCTGCAAAAG AGACTGGCTA TTTAAAAGAT CTCAACTACA TAGATGAGAT TGGATTGGCT
CACTATAGTG GCAGTAGAAA GTCGCTGATT ATTCTTGCAA CGGGATGTCA AGGAGATGAG
CTGGCTGCCG TTAATAGGCT TTCACAGGGT ACGCATAATA GTTTCGCCAT CAATGCTGAT
GACACTATCA TCTTTTCCTC GAAAATGATT CCAGGAAACG AAAAGAGGAT AGCAAAGATG
ATTAATAGGT TTATTGCTGT GGGTGTGAAT GTTGTGACTG AGAGAACGCA TTCCGTGCAT
GTTTCGGGAC ATCCATACAG AGACGAGTTA AAGCAGCTAT ATCAGTTGCT TAAACCAAAG
ATTCTTATTC CCGTGCATGG AGAAAATCTA CATCTTCACG AGCATGCGAA ATTTGCACTG
GAATGCGGTG TGGAAAGCGC TTTAATTGCA ATGGATGGCG ATATAATTGA GATATCTTCC
ACGTCCGGTG CACGCAAGGT CGATCAGACA GAAGTTGGCT TCTGGTGTGT GGATAATGAT
AGGTTACAAC ATCCTGACAG TCACGTTATC AAGACAAGGA GGAAGTTGCA ATTAAGTGGA
ATGATTTTGG TAATCCTTGT GATGAACAAA AAAGGAAAAT CACTAAAGAG GCCTACTATT
GTTTCATTTG GTTATAGCGA GGAAGGAGGA TGGAAGGAAA ATGCCTTGGC TTCGATCGAG
AGGAGCTTGA AAACGGGTAA AAATAGTGAT TTTAGGGCAG TCACGAAGAC AGTGAGGAAG
ATTGTGCGTG GTTCACTGGC GAGCAGGATA AAGATTCCAT TGATAGAAGT GCAAATAGAA
AGGGTATAG
 
Protein sequence
MTDNNLIFLP LGGTGEIGMN VTLYGYKGRW IMIDCGAGFA DAELPGIDIV VADISFIEER 
KDDLLAIIIT HIHEDHCGAL PYLWDRLAVP VYTTQFTANF LLKKIGRDKV QFPIHVVEPG
KLLHLGDFTL EFINMTHSVP EMNAIAIHTA DKVVIHSGDW KIDDDPVVGK TCDFKRLEEL
SEKGVLAMVC DSTNVFSHGR SDSESSLREP LMEVISSASG ACVVTLFSSN IARIETVTRI
ANEYGKTVVV LGRSLLSVIS AAKETGYLKD LNYIDEIGLA HYSGSRKSLI ILATGCQGDE
LAAVNRLSQG THNSFAINAD DTIIFSSKMI PGNEKRIAKM INRFIAVGVN VVTERTHSVH
VSGHPYRDEL KQLYQLLKPK ILIPVHGENL HLHEHAKFAL ECGVESALIA MDGDIIEISS
TSGARKVDQT EVGFWCVDND RLQHPDSHVI KTRRKLQLSG MILVILVMNK KGKSLKRPTI
VSFGYSEEGG WKENALASIE RSLKTGKNSD FRAVTKTVRK IVRGSLASRI KIPLIEVQIE
RV