| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0802 |
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| Symbol | pdhA |
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| ID | 3931953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 712430 |
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| End bp | 713434 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637900958 |
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| Product | pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase alpha subunit |
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| Protein accession | YP_506677 |
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| Protein GI | 88608016 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.565164 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTGGTT GCGTATTTGA TTGGTACCTC AGATGTATGT TGCTTGAACC TTTAGATTCG
TCGGTTCTTT TGCCTCTTTA TGAGAAAATG CTGTTGATCC GGCGCTTCGA AGAGAGGGCG
GGGCAGCTCT ACAGCATGGG CGAGATATGC GGTTTTTGTC ATCTTTACAT AGGACAGGAA
GCGGTTGCTG TTGGTCTGGA CTACTGTTTG AAGAGGGAGG ATTCTGTCAT TACTAGCTAC
AGGGATCATG GTATGATGCT TGTCCGAGGT TCTTCTCCCG ACGTGATGAT GGCTGAACTT
TTAGGGAAAT CCTCCGGTTG TTCTAATGGT AAGGGTGGGT CTATGCATAT GTTTGATCCT
GAGAGGAATT TCTTCGGGGG TCATGGTATT GTTGGTTCGC AAGTCTCCTT AGGGACAGGT
ATAGCTTTTG CTGAGAAATA CAGAGACTCT AACGCTGTTG TTGCGAGTTG TTTTGGGGAT
GGCGCGATTA ACCAGGGGCA GGTCTATGAA TCTTTTAATA TGGCTGCCCT GTGGAAACTT
CCTATACTTT ATGTTGTGGA AAATAACATG TACGCTATGG GTAGCTCCGT TGAGAGCGTG
TGCGCGAATT CTTCGCTTTC CAATAGGGGT GAATCGTTTG GAATACCTGG CTACTCTGCT
AATGGTATGG ATCTGATGGA TGTGATTCGT GTCACGATGA ATGCAGTTGA GGGTGTGCGG
GGCGGAAGCG GTCCGGTTCT TGTAGAGTAT AAAACTTATC GATTCAAGGG GCACTCCATG
TCTGATCCAG CTTCTTATAG GTCTAAGGAG GAGGTTTCTT CCTTCAAGGA GCGGGATCCT
CTGAAAAGTG TGGAAACCTT GCTTCTGCAG GCAGGCGTGT TGCACAGCGA GCTAGAACGT
GTGCAAAAGG CAGTTAAAGA TCAGGTATCG AGTAGTGTGG CTTATGCACG CGCCTCTACT
TTTCCTGATA AGGCAAGTCT CATGACGGAT GTTTATTCAG AGTGA
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| Protein sequence | MPGCVFDWYL RCMLLEPLDS SVLLPLYEKM LLIRRFEERA GQLYSMGEIC GFCHLYIGQE
AVAVGLDYCL KREDSVITSY RDHGMMLVRG SSPDVMMAEL LGKSSGCSNG KGGSMHMFDP
ERNFFGGHGI VGSQVSLGTG IAFAEKYRDS NAVVASCFGD GAINQGQVYE SFNMAALWKL
PILYVVENNM YAMGSSVESV CANSSLSNRG ESFGIPGYSA NGMDLMDVIR VTMNAVEGVR
GGSGPVLVEY KTYRFKGHSM SDPASYRSKE EVSSFKERDP LKSVETLLLQ AGVLHSELER
VQKAVKDQVS SSVAYARAST FPDKASLMTD VYSE
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