Gene NSE_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0796 
SymbolpccB 
ID3931790 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp706523 
End bp708079 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content44% 
IMG OID637900952 
Productpropionyl-CoA carboxylase, beta subunit 
Protein accessionYP_506671 
Protein GI88608690 
COG category[I] Lipid transport and metabolism 
COG ID[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCGTAA ATAGATCAAT TAGGTATAAT ACAACCTGTC TGTCAGGCAC CTTTAGCATG 
CAAAAGTCTC TTCAGCTTTC CCTAGATGAG TCAACAAAAG CACAAGCTAC AACTTCCAAA
CTTACTGCCC GTGAAAGATT GGAAATCCTG TTCGATGATG GGAAATTTGT GGAGATTGAT
AGCCTAGTTC GCCACAGGTG TACCAATTTC GGACTCGAAA AAAAATCTGT GGATGGAGAT
GGTGTAATTG CAGCACATGG TCAAATCAAT GGGAGAAGTG TCTTTGCGTA TTCACAGGAT
TTTTCAGTGT TTGGCGGGTC ACTCAGTGAA AGGAATGCTG CGAAGATCTG CAAAATCATG
GACCTTGCAG CCAAGACTCG TGCCCCTATC ATCGGGATAA ATGACTCTGG CGGTGCAAGG
ATACAAGAAG GTGTTGACTC CTTAGGTGGA TACGGAGAGA TATTCTTGCG CAATGTCCGA
CTCTCCGGTG TTGTGCCACA AATTTCACTG ATTATGGGGC CATGTGCTGG TGGTGCTGTG
TACTCACCCG CATTGACCGA CTTTATTTTC ATGGTTAAAG AGACGAGCTA TATGTTCGTT
ACCGGACCAA AAGTCGTAAA GACTGTTCTC AAGGAAGATC TTACACAAAA TGAGCTTGGT
GGTTCCGAGA TACACACGAA AAAATCAGGC GTATGCGACA GAGCATTTGA AAATTCTGTT
GAGCTGCTTA TTGCGGTGAG AAATTTTCTT GATTTTCTAC CGCAAAACAA CACCGAAACC
CCACGTCAGA GAGAGTGCAC CGACCCCGTC TGCAGGCAGA TCGAATGGCT AGATCGTGCT
ACTCCGGTAG TATCAAACTT ACCGTATGAT ATGAGCAATA TCATAAGGGC AATAGTCGAT
GATGGGGAGT TCTTTGAACT TTCGCCTGAT TTTGCAAAAA ACGTATTGAC TGGTTTTGCT
CATATTGGCG GGATTCGTAT AGGTATCGTT GCAAACCAAC CATCTGTTCT AGCAGGTTGC
CTTGATATCA ATTCTTCCAG GAAAGCAGCG CGCTTTGTTC GTTTCTGTGA TGCCTTTAAC
ATCCCGATCC TTACGCTCGT CGATGTACCA GGTTTCTTGC CTGGATCTTC TCAGGAGCAA
AATGCCATTA TAAAACACGG AGCAAAATTG CTTTATGCAT ATGCCGAAGC AACGGTCCCA
AAAGTGACAC TCATCATAAA AAAAGCTTAT GGTGGTGCCT ACATAGTGAT GGGATCGAAA
CATCTTGGTG GAGACGTGAA CTTTTCATGG CCGAATGCAG AAGTTGCTGT GATGGGGCCG
GAAGCAGCTG TAGAAATCGT ATTTAGGCGA GAAATCGATA CACCAAACAA AATCGCGGAA
TTAGCAGCAG ATTACAGAAC ACAGATTGCA AATCCAAGAG TACCCGCTGC ACGTGGATAT
TTGGACGATA TAATCAAACC TTCGGATAGC AGAAAAAAAA TAGTAGAAGC CTTCAGAATG
CTGGCTAGCA AGACGATGGA AAAACCATGG AAAAAACACG ACAACCTTCC ACTCTAG
 
Protein sequence
MTVNRSIRYN TTCLSGTFSM QKSLQLSLDE STKAQATTSK LTARERLEIL FDDGKFVEID 
SLVRHRCTNF GLEKKSVDGD GVIAAHGQIN GRSVFAYSQD FSVFGGSLSE RNAAKICKIM
DLAAKTRAPI IGINDSGGAR IQEGVDSLGG YGEIFLRNVR LSGVVPQISL IMGPCAGGAV
YSPALTDFIF MVKETSYMFV TGPKVVKTVL KEDLTQNELG GSEIHTKKSG VCDRAFENSV
ELLIAVRNFL DFLPQNNTET PRQRECTDPV CRQIEWLDRA TPVVSNLPYD MSNIIRAIVD
DGEFFELSPD FAKNVLTGFA HIGGIRIGIV ANQPSVLAGC LDINSSRKAA RFVRFCDAFN
IPILTLVDVP GFLPGSSQEQ NAIIKHGAKL LYAYAEATVP KVTLIIKKAY GGAYIVMGSK
HLGGDVNFSW PNAEVAVMGP EAAVEIVFRR EIDTPNKIAE LAADYRTQIA NPRVPAARGY
LDDIIKPSDS RKKIVEAFRM LASKTMEKPW KKHDNLPL