| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0756 |
|---|
| Symbol | glyS |
|---|
| ID | 3932153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 672338 |
|---|
| End bp | 674428 |
|---|
| Gene Length | 2091 bp |
|---|
| Protein Length | 696 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637900912 |
|---|
| Product | glycyl-tRNA synthetase, beta subunit |
|---|
| Protein accession | YP_506631 |
|---|
| Protein GI | 88608720 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
|---|
| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATAAGT TTCTTCTAGA AATTTTGTCT GAAGAAATGC CTGTCGCTCT GCAAAGTTAT
GCGCAGAAAA GTTTTTTTGA CCTTTTTTCA TCTGCCACTA AGGACCTAAG TGTTGGAAAG
ATAGAAGTCT TTACTAGTTG CAGGAGGATA GCAGTACTCA TAGATGATGT AAAAAGCGAT
CTCGTAAATC AAAAAGTTGA TAAAAAGGGT CCAAGTGTTG GTTCAGATCT TTCTGTTGTG
GAGAGGTTCG CCACTTCAAT GGGTGCTAGT ACTGCGGATT TATATCTCAA GAGTATTGGA
AATAAAGAAT ATTATTTTGC TCCAGTTGCA GGAAAAGTGC TCCACATAGA TGACATTATG
AGACAACGGA CCGAGGCTAT ACTCAGGAGT TTTTCATGGC CTAGGTCAAT GCGATGGGGG
AATTATTCTC TGAACTGGAT CAGGCCCATA AAAAGCATTG TTTGTATGCT TGGAAAATCC
ATCATTCCCG TGCAGTTCCA TCATTATACT GCGGGAGCGA TAACAGTGGG TCCTTATGTT
GATCCTGCCT TGCAAAAAAT CAAAATCACA TCTGCTGAGG AATATCAATC CATTTTGATG
AAAGGGGGTG TTATTCTGTC CCAGATTGAA AGGGAGAACC TTATAAAAGA GCAAATATCT
CAGCTAGAGG CTGAGCATGG ATTTTCTGTT TGCGTGACGG AGGAGTTATT GAATGAGGTT
GTTGGAATTA CCGAATCGCC TAATGTGCTC CTGGGATCGT TCCCGCAGTC ATTTCTGGAG
CTCCATGAAC GCATAATAGA AACAGTTATT GTTTCTCACC AGAAAGTTTT TCCGGTGTCA
AAGAATGGTA AGCTCCTGAA TAAATTTGTG TTTGTTAGTT CGATTGCTGG CGATGCACCA
ATTAGGGGAT ATGAGCGCGT GATTACAGCA AGATTAGCTG ATGCAGCGTC AATGGTTCTG
ATTGATTCTA AAAATCCCTT GCGCGAACTA AGTCCAAAAC TAAAACAGCT GATTTTTCAC
AAGAAATTGG GTAGCTTTAG TGAGAAAGTA CAGCGTGTTA GGGCATTGGC AAAGTTTATT
GCGTTTTGGG TGCCAAACGC TTCCATTATA AAAGTGGAAG AAGCTGCTAA ACTTGCTAAG
CTGGATTTAT TGACAACGTT TGTCCGTGAT TTTCCCAAGC TGGCTGGTTT TATGGGCTCT
CACTGCTTAA GCCTGTGTGG TGAGACAGAT GTTGAAATTA TTGATGCAGT TAGGGATCAT
TATTTGCCTG TTGATGCGGC AGATATTTGC CCGACTGCTC CCGTCACAGT GACGCTTGCA
CTAGCTGATA AAATAGATAC TTTAGTTGGC TTGATCAGCG TAAAAGAGAA AGTTACTTCC
ACTCGTGATC CGCTTGGTAT AAGGCGCGCA GCTATTGGTG TGTTGCGTAT CATCATAGAA
AATAAACTGG ATGTTCCACT CCAGGTCTTC TTAATGAAAG CGATTGATTT GTATCCCTCG
TCTTTATTTT TTTCTCTTAT CAAAAAGATT GGTGCTAGCT CTGATGAAGA GAAGCAACGG
AAAGATGATG TTGTGAATTT CACATTAAGT TTCTTTTCCG AGCGTCTAAA GGCGCTGCTA
TTTAAAAGTG GTGTGAGCCA AGCAGTTTTT GCTTCGGTTA GTAGCGGAGT TACGCGTCCT
CTGGTGCTAA CGGAGAAGTG TATTGCTATT TCTGAATGGC TCAAGCAAGC CGAGGGTGCT
GAATTCATGC GGCTTCATAA GAGGATGATG GGTATCCTTA AGGGCTTTTC TGGTTCTGCT
AAAGCAAAGT TTAGTAAAAA AGTACTCGTT CTACCAGAAG AGGTGAGTCT GGTACAAGAG
TTTGAGGGTT TTCAATCACT TTTTTGTAAT GCCATAAAGG AGCGGAATTT TGAAATGGCA
TTTTCACGGT GTGCTGATCT TTTAAAGCCA ATCACGGTTT TTATGGATAG TGTGCTTGTT
AATGTTGAAG ATCCTGAACT TAAGAAGAAT CGTATTGGGT TGTTACTCTC AATAAGTGAA
ACTTTAAATG AATTATGTAA TTTTGATGTC CTGTCCAGGA ACTTTTCATG A
|
|---|
| Protein sequence | MHKFLLEILS EEMPVALQSY AQKSFFDLFS SATKDLSVGK IEVFTSCRRI AVLIDDVKSD
LVNQKVDKKG PSVGSDLSVV ERFATSMGAS TADLYLKSIG NKEYYFAPVA GKVLHIDDIM
RQRTEAILRS FSWPRSMRWG NYSLNWIRPI KSIVCMLGKS IIPVQFHHYT AGAITVGPYV
DPALQKIKIT SAEEYQSILM KGGVILSQIE RENLIKEQIS QLEAEHGFSV CVTEELLNEV
VGITESPNVL LGSFPQSFLE LHERIIETVI VSHQKVFPVS KNGKLLNKFV FVSSIAGDAP
IRGYERVITA RLADAASMVL IDSKNPLREL SPKLKQLIFH KKLGSFSEKV QRVRALAKFI
AFWVPNASII KVEEAAKLAK LDLLTTFVRD FPKLAGFMGS HCLSLCGETD VEIIDAVRDH
YLPVDAADIC PTAPVTVTLA LADKIDTLVG LISVKEKVTS TRDPLGIRRA AIGVLRIIIE
NKLDVPLQVF LMKAIDLYPS SLFFSLIKKI GASSDEEKQR KDDVVNFTLS FFSERLKALL
FKSGVSQAVF ASVSSGVTRP LVLTEKCIAI SEWLKQAEGA EFMRLHKRMM GILKGFSGSA
KAKFSKKVLV LPEEVSLVQE FEGFQSLFCN AIKERNFEMA FSRCADLLKP ITVFMDSVLV
NVEDPELKKN RIGLLLSISE TLNELCNFDV LSRNFS
|
|---|
| |