| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0743 |
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| Symbol | virB8-2 |
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| ID | 3932083 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 663617 |
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| End bp | 664294 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900899 |
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| Product | type IV secretion system protein VirB8 |
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| Protein accession | YP_506619 |
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| Protein GI | 88608885 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.123986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTGAGGT TTTTCAAAAG CAAAAGCGAA GCGAAACAAA AGGTGGCCCA CTGGTACGAG
GAGCACGTAG GACGGGTTAC TCTGCAAAGG AACTTTCTTG TGGTGCTGAA CTTGGGGGTC
ATAGTAGCCC TTATGTTAGT TGTTTTTGCT TTGTTTGCGG TTAGTAGTTC AAGAACAATA
GAGGCTTTTG TGATCGAAGT TTCCAAGAAA ACCGGAACTA TAGCACGCGT CAATCCTGCT
ACGGTAAAGG AGTATTCTGC AAACAGGGCA ATAACGAATT ATTTTGTTAC GCAGTATGTA
AAGGCAAGGG AGGTTTTTCA TCCTGCAACG TATCGTTACG ATTACTACAC CACAGTGAGA
GTATTTTCAG ATCCTAGCCT TTATACGCTG TTTAAGGGAT CTCTCTCCTT AAGTAATCCT
ACAAGTCCGC TCAACTTATA CGCTAATGTA GCGGATTCTA AATACGAGGT TCGCTCCATA
AGACATCTAG ACAGTGATAC GGTTCAGATG AGAATTACTA TGAGATTTGT AAATAGTGAT
GGTGGAGTGA GTGTCACAAA TAAGATTGTG TCTGTCAGAT ACAGTTATAT GGATCTTGAT
CTTTCAGAAG AGGATAGGCG CCTCAATCCT CTTGGTTTTG TTGTTGTTTC TTATCAGGTA
GATGATGATC ATTCGTGA
|
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| Protein sequence | MVRFFKSKSE AKQKVAHWYE EHVGRVTLQR NFLVVLNLGV IVALMLVVFA LFAVSSSRTI
EAFVIEVSKK TGTIARVNPA TVKEYSANRA ITNYFVTQYV KAREVFHPAT YRYDYYTTVR
VFSDPSLYTL FKGSLSLSNP TSPLNLYANV ADSKYEVRSI RHLDSDTVQM RITMRFVNSD
GGVSVTNKIV SVRYSYMDLD LSEEDRRLNP LGFVVVSYQV DDDHS
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