| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0717 |
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| Symbol | trmE |
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| ID | 3931628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 636509 |
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| End bp | 638161 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900873 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_506593 |
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| Protein GI | 88608741 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAACGA TATACGCGCT TTCTACTGTT TTTGGGAAGT CAGGCGTAGC TGTTTTTAGA
ATTTCTGGGC CAGACGCACT GCGGGCTCTA GAACTCCTTG GGTTAGATAT TAAGCAGCCC
CGTCCTAGAT TTGTGTACTT TGCAAGACTT TTCGATGAGC AACTCCTAAT CGATGAGGTA
TTGGTTGTTT ATTTTGCTTC TCCTGCGAGT TTTACTGGTG AGGATGTTGT TGAGCTGCAT
TCACATGGTA GCATAGCAGT TCTGCGGTAT ATCAGTGAGA AGCTTTCTAC TTTGTTCAAA
CCTGCTGAAC CGGGTGAGTT TACCAGGAGA GCAGTTCTGA ATAACAGAAT GGATCTCACT
AAAGCAGAGG GCATAATAGA TATAATTAAC TCTGAGACCC AAGAGCAATT AAAACAAGCC
TCTCGGCATT TATCGGGGAA ATTAGCTGAG GAATATAACT CTCTACGCGA TAAAATAATC
AAAGTACTTT CGTATTTGGA GGCTTATATA GACTTTCCAG ATGAAGAAAT ACCAGAAACT
GTACTTGCAG AGATACAACA ATCGATTGTT GCTATACAAT GCGACATTTC TCGTTATCTT
GCTGACGGTA AAGTTGGAGA AAAAATTAGA GAAGGTTTCT CGGTTGTAAT AGTTGGGAAA
CCCAATGTAG GTAAGTCGAC GCTTTTTAAC TATCTTGCTA AGAGGGATCT TGCAATTGTT
ACCGATATTC CAGGTACTAC AAGAGACATA CTGGAGGTAA GACTAGATTG TCATGGTTAT
CCAGTGATCC TATCAGATAC GGCCGGAATC CAGGAAACCT GTGATGCAAT AGAAAAAATG
GGTATAACTA GGGCGCTCAA AAAAGCAACC GAAGCAGATG TAATTGTCTT TCTCAGGGAT
ATAACCGAAT TGCATCTCAC AAATGTTAGA CGCGAAGATG TAGCAAACTC AGTCATTGAA
CGACATCTGG ATAGGCAAGT AGCAGCTTTG GGAAGTAGAG AGCACATACA AATTGATCAA
AGACATGTAG ATAAGCTTAT AGGTTCAAGT GACTGGGCGC AGGAAATGCA ATTGAACGAG
GCGGGTGTTA GAAGTAAGAA TATGAACTAC CCGGATATTG AGGAGAGGGA TCTCAATTTG
CGAGATATTC TTGATGAACG GCATGAAGAG AAAGACCGTA GTGTGATGTG TCACGACATG
ATGCAGGAGC ACGATCCAGA TAATGGTGAG TGTAGCGATG ATGTCGATAG AAGATTCAAT
GAATTATTTA CAGCTGCAAA AAAGCTAGAA ATTCCTGTAG TAAAAGTTGT GACGAAGGGT
GACATTGCAC CCACACAGTT GTCATTTTGG CAAGATAAGG GGTACATATG CATATCCGTA
TATAAAGGAG AAGGTATGCA GCTTCTTCTT GATAAGATCT TTGATATTAT CTCGTCTTCA
AATATTGAAG CTCACATTAT TACACGTGCG CGGCATCGAC TGGCATTGGA GAATGCTTTA
GAGCATCTGC GACGTTTTAA TACAGATCTC CCAATCGAGC TTGCAGCAGA GGAAATCAAG
CTTGCAGCTA ATCATATCGC ATCTGTTACA GGTGAGATTA AGTTGGATGA TGTCTTGGAT
GAGATTTTTT CCTCGTTTTG CATAGGTAAA TGA
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| Protein sequence | MSTIYALSTV FGKSGVAVFR ISGPDALRAL ELLGLDIKQP RPRFVYFARL FDEQLLIDEV
LVVYFASPAS FTGEDVVELH SHGSIAVLRY ISEKLSTLFK PAEPGEFTRR AVLNNRMDLT
KAEGIIDIIN SETQEQLKQA SRHLSGKLAE EYNSLRDKII KVLSYLEAYI DFPDEEIPET
VLAEIQQSIV AIQCDISRYL ADGKVGEKIR EGFSVVIVGK PNVGKSTLFN YLAKRDLAIV
TDIPGTTRDI LEVRLDCHGY PVILSDTAGI QETCDAIEKM GITRALKKAT EADVIVFLRD
ITELHLTNVR REDVANSVIE RHLDRQVAAL GSREHIQIDQ RHVDKLIGSS DWAQEMQLNE
AGVRSKNMNY PDIEERDLNL RDILDERHEE KDRSVMCHDM MQEHDPDNGE CSDDVDRRFN
ELFTAAKKLE IPVVKVVTKG DIAPTQLSFW QDKGYICISV YKGEGMQLLL DKIFDIISSS
NIEAHIITRA RHRLALENAL EHLRRFNTDL PIELAAEEIK LAANHIASVT GEIKLDDVLD
EIFSSFCIGK
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