Gene NSE_0697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0697 
Symbol 
ID3931727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp617994 
End bp618746 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content40% 
IMG OID637900853 
Productputative ABC transporter, permease protein 
Protein accessionYP_506573 
Protein GI88608548 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATAATC ATATTAAAAA TACAATTAAG ATCTTCGGCG ATTTTACGCT CTTCAGCCTA 
AGCACGTTCC TGAGCGGTAG GAAGATATAT TTTTCGGAAA TAATAAAACA GCTATTCTTG
ATAGGATATT ACTCGATGCC AATCGTTGCA TTTTCTGCTG TGTTCATAGG AGCAATGTTG
GCGTTCCATA CCTATACTGG CCTTGATCTT TTTCAATCAC AAACGATGGT TGCGCAAATC
TTAGCAAAAT CGATCACTCG GGAAATAGGA CCCGTTGTTG TTGGTATAGT AGTTGCAGGA
CGAGTTGCTT CAACAATAGC AGCAGAGATA GGAACAATGC GAGTGACAGA ACAAGTGGAC
TTATTGAGGT CACTCTCGAT CAATGTGCAT GCGTACCTTG TACTTCCCAA GATCATCGCA
GCGCTGATTT CTTTTCCTGT GTTAGAGATA GTCTCTACAC TCTTTGGAAT GCTGGGCGGT
TACCTTATAG GAACATACAA ATTTGCCTTT AGCAAAATGC TTTATGTATC AGATACACTT
ACCTTTCTTA CATCCAAGGA TCTTATTGCT GGAATGACAA AATCGTTCTT TTTTGGCTTT
ATTACAGCAA GTGTAAGCTG CTTTAATGCT TTGAGAGCCA CACATGGCGC AAAAGGGGTT
GGAATTGCCG TAACAAATTC GGTGGTGGCA TCCTTTGTCT TAATACTGTT GTCAAACTAT
CTGATCACAT TAGCGATATT CCATGAAAAA TAA
 
Protein sequence
MYNHIKNTIK IFGDFTLFSL STFLSGRKIY FSEIIKQLFL IGYYSMPIVA FSAVFIGAML 
AFHTYTGLDL FQSQTMVAQI LAKSITREIG PVVVGIVVAG RVASTIAAEI GTMRVTEQVD
LLRSLSINVH AYLVLPKIIA ALISFPVLEI VSTLFGMLGG YLIGTYKFAF SKMLYVSDTL
TFLTSKDLIA GMTKSFFFGF ITASVSCFNA LRATHGAKGV GIAVTNSVVA SFVLILLSNY
LITLAIFHEK