Gene NSE_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0646 
Symbol 
ID3931972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp566524 
End bp567702 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content40% 
IMG OID637900802 
ProductpolyA polymerase family protein 
Protein accessionYP_506524 
Protein GI88608101 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTCG AAACAAGCTG GACTGAGGAC TTAAGAACCC TCGTTCAAAT AATACGTAAT 
AATGGCGGAG AAGCAAGATT CGTTGGCGGC TGCGTGCGGG ACCAGCTCTT AGGAAGAAAA
ATTAGCGATA TTGATCTGGC TACAACCCTC AAACCAGAAG AAGCGATAAG GGCACTCAAA
ACAAACGGCT TAGTAACTAT TCCCACTGGG CTTAAGCACG GTACCTTCAC TGTTCTAGTC
AATTCAAGAC CAATTGAGAT AACAACACTA AGGCAGGATC TACACTGCGA TGGGCGTCAC
GCAACTGTTT CATTCACAGA TAGCTGGAAA GAAGATGCTC AAAGACGGGA TTTCACATTC
AATGCAATGT ATATAGACAT CGAGGGTAAT ATTCATGATT ATTTTTCCGG ATTGGAAGAT
TTACAGAACA GACGATTAAA ATTTGTCGGA GAACCTCATC AGCGAATCGA AGAAGATTAT
CTACGCATAT TGAGAGCATT TCGCTTCCAG GCATCTATTT GCAAGACACC GCTCTCGGAA
GAAATCCTTC ATGCTTGCAC AAAGTACAGA AAAAAAATCT CTTCACTTTC GGGTGAGAGG
ATCCAAGGAG AAATGTTTAA ACTGCTTTCT TATGTGAACT TCCTTAGCAC AGTTTTCACA
ATGCAGGAAG CAAAAATAAT AGACGAAGTT CTAGGTGCGA AAGTGTCCTT CTCAGGATTA
GATTATGAAA AAAGTCGGCT TATACAAGAT CATATCGCGG CTTTGACGCT ACTCATAAGG
AATACAGAGA ATAGCTATAA CCTACAATGG CTGTATTCAC GATGGAGAAT CTCGAAAAAG
GTACAAAAGG CTATTTCAAT TCTTTCAGAA GAAAAAGAAA TGCACTGTCC AAAAAAGACC
CTGGCAAAGC TCGGCAATGA GCTCACAAGA AAACTGATTA ACATCCTGTA TGCAGAAAAT
AAACTGTCTG ACATACAACG CAAAGATTTT ATGTTGGTCA CAAATAATTC TGAAAGACCA
ATTTTTCCGG TAATGGGTAG GGATCTTATA CCGCTGGGTT ACACCGGACC CGAGATAGGA
AAGAAATTGA AGCAATTAGA ATATCTATGG AGAGAAAGTA GTTGTGTCCT CAGTAAAAAC
GAGCTCCTTT TGATGGCAAT TAGGAAACAA GTAAATTAA
 
Protein sequence
MKVETSWTED LRTLVQIIRN NGGEARFVGG CVRDQLLGRK ISDIDLATTL KPEEAIRALK 
TNGLVTIPTG LKHGTFTVLV NSRPIEITTL RQDLHCDGRH ATVSFTDSWK EDAQRRDFTF
NAMYIDIEGN IHDYFSGLED LQNRRLKFVG EPHQRIEEDY LRILRAFRFQ ASICKTPLSE
EILHACTKYR KKISSLSGER IQGEMFKLLS YVNFLSTVFT MQEAKIIDEV LGAKVSFSGL
DYEKSRLIQD HIAALTLLIR NTENSYNLQW LYSRWRISKK VQKAISILSE EKEMHCPKKT
LAKLGNELTR KLINILYAEN KLSDIQRKDF MLVTNNSERP IFPVMGRDLI PLGYTGPEIG
KKLKQLEYLW RESSCVLSKN ELLLMAIRKQ VN