| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0641 |
|---|
| Symbol | |
|---|
| ID | 3932037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 560830 |
|---|
| End bp | 561567 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637900797 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_506519 |
|---|
| Protein GI | 88608408 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0217] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGTC ATTCTCAGTA TGCCAATATA AAGCATAGGA AAAACGCTCA AGATGCGAAG
CGGGCAAGGA AGTTTACCAA GTTGAGAAGA GAGATTCTCG TTGCAGCGCG TTCTGGCCTT
CCAGATCCTG AATTTAACCC GCGTTTGCGG TCCGCTCTTG CAAATGCACG GCGTTTTGGC
CTTCCGAAGG ATAAAATCGA GTCTGCGATT AAGAGTTCAA CTGACAAAAC GGAAGGTGAT
TATCAAGAAG TGTGCTATAT GGCTGCTAGT TCTGGTGGCA TGTGGCCTAG TGGTTTTGCA
GTCGTTGTGA CTGCACTGAC GGATAATAAG AACAGGACTG CCTCGAATGT TAAGCATATT
CTTTCTAAAT CTGGTTTGGT TTTAGCCGAC GTTTCTTTTA TGTTTGAGAG TTTCGGGGTT
TTTTCGTACC CGAAATCTAC AGATTTCGAC AAGCTAATGG AGGTCGCTCT TGAAGCTAGC
GCATTGGACA TTAAGACTGA AAAGAACCAC TTTGATGTCT ATTGTAGCAG GGAGAGTTTC
GCTGCAACTT CCTTAGAACT GAGAAAGAAG CTCGGAGAGT ATGAACATTC GGGACTGGTA
TGGAGGGCAA AGACACATCA AGAAGTACCG CCTGAGGTGC ACGTCCGTTT AGAAAAATTG
GTAGATGCTC TCGAGGAAGA TGACGATGTC CAGCGCGTCT ACACTTCCAT ACTCACAGAG
CGGCAATCAG AGAAATAA
|
|---|
| Protein sequence | MAGHSQYANI KHRKNAQDAK RARKFTKLRR EILVAARSGL PDPEFNPRLR SALANARRFG
LPKDKIESAI KSSTDKTEGD YQEVCYMAAS SGGMWPSGFA VVVTALTDNK NRTASNVKHI
LSKSGLVLAD VSFMFESFGV FSYPKSTDFD KLMEVALEAS ALDIKTEKNH FDVYCSRESF
AATSLELRKK LGEYEHSGLV WRAKTHQEVP PEVHVRLEKL VDALEEDDDV QRVYTSILTE
RQSEK
|
|---|
| |