| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0566 |
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| Symbol | nuoD |
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| ID | 3931446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 491751 |
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| End bp | 492917 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637900722 |
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| Product | NADH dehydrogenase subunit D |
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| Protein accession | YP_506448 |
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| Protein GI | 88608146 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGTAA TAAAGGAGCT TAACTTCGGG CCTCAGCATC CGGCTGCGCA TGGGGTGCTC
CGCCTGATTA TGCAGCTTGA TGGGGAGACA GTTGAGCGCC TTGATCCGCA TATTGGTTTT
TTACACAGAG GAACTGAGAA GCTAATAGAG CATAAAACGT ATCTTCAGGC TTTACCGTAC
TTTGATAGGC TGGATTATGT CTCACCGATG GCACAGGAGC ATGCCTATTC GCTTTGCGTA
GAAAAGCTGC TCGGCATTAC GGTACCTCCT AGAGCGCAGT ATCTGAGGGT AATCTTTGTC
GAGATCACTC GCATTTTGAA TCACCTACTA AATGTCACTA CTCACGCGCT TGACGTAGGT
GCTATGAATC CCTTGTTTTG GATGTTTGAG GAGCGTGAGA AGATGCTTTC TTTCTATGAA
AAGGCTTCTG GGGCGAGATT CCATGCTGCG TATATACGTC CTGGTGGACT GGCTGCTGAT
ATACCAGATG GTCTCGACGA AGAAATAATG TCCTTCTTGG AGAGTTTCAC ACATAAGCTT
GACGATGTGG CAGATGTTCT TACAGACAAT CCAATTTTTA AACAACGCTT AGTTGATATA
GGTAAAGTAA GTAAACGGGA AGCAGTTGCA CTTGGTTTCT CTGGACCAGT TTTGCGTGCT
TCGGGTGTAC CTTGGGATCT ACGTAAAAGT CAGCCATACG AAGTATATGA GTCGTTGGAT
TTTGCGATTC CGGTGGGAAG TTGCGGAGAT TCGTACGATA GATATTTGGT GAGGATGGCT
GAAATGTATG AATCAGTCAA AATCATTAAA CAATGTATAG ATAAGCTTCC AGAAGGGCCG
GTTGTGGTGG ATGATAGGAA AGTTGCTCCG CCGAGTCGTG CTGAAATGAA AACTTCCATG
GAAGCTCTTA TTCATCACTT TAAGCTTTAT TCAGAGGGCT ATCATGTTCC TGAGGGGGAG
ACATATTTTG CAGTAGAATC TCCAAAAGGA GAGTTTGGAG TTTATATTGT TTCCGATGGC
ACGAATAAGC CATATCGTTG CAGGATCCGT GCACCTGGGT TTGTTCATCT ACAAGCCCTT
GATACTCTTT CACGGAAACA TCTTCTTGCC GACGTACCTG CTATTCTTGG GTCCTTGGAC
ATTGTTTTTG GTGAGGTAGA CAGATGA
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| Protein sequence | MTVIKELNFG PQHPAAHGVL RLIMQLDGET VERLDPHIGF LHRGTEKLIE HKTYLQALPY
FDRLDYVSPM AQEHAYSLCV EKLLGITVPP RAQYLRVIFV EITRILNHLL NVTTHALDVG
AMNPLFWMFE EREKMLSFYE KASGARFHAA YIRPGGLAAD IPDGLDEEIM SFLESFTHKL
DDVADVLTDN PIFKQRLVDI GKVSKREAVA LGFSGPVLRA SGVPWDLRKS QPYEVYESLD
FAIPVGSCGD SYDRYLVRMA EMYESVKIIK QCIDKLPEGP VVVDDRKVAP PSRAEMKTSM
EALIHHFKLY SEGYHVPEGE TYFAVESPKG EFGVYIVSDG TNKPYRCRIR APGFVHLQAL
DTLSRKHLLA DVPAILGSLD IVFGEVDR
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