Gene NSE_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0554 
Symbol 
ID3932119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp482826 
End bp483344 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content39% 
IMG OID637900710 
ProductHK97 family phage prohead protease 
Protein accessionYP_506436 
Protein GI88608127 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGAAA AAAAAGTTAT TTTTGACATT GATACAAAGA ACCTCAACGA AGAAGGTGTT 
TTTTATGGCT ATGCTAGTGT CTTTGATGTA GTTGATGAGC AAGGAGATAT TATCAGTAGT
GGTGCTTTTG ACTTGACGAA GTGTGTACCA CTTTTGTGGC AACACAGGCA AGATCAACCT
ATTGGGAAAG TTCTTGAAAT GCAGGAAACT GAGAAAGGAC TTTATTTAAA AGGTCATATA
ATTATGGAGG TGAATCAGGG GTATGAAGCG TATAAGCTGC TCAAGGCAGG AGTGCTAAAC
GGGCTGTCAA TTGGATACAT ACCAAAAAAG TATAAGATGG ATAAGCACAC AGGAGCGAGA
GTTATGACAG CTGTGAAACT CATAGAGGTA AGCCTCGTGA CCTTTCCAGC AAACAAGTAT
GCAAGGGTAA GCTCCGTGAA AAGTCAATAT GATGCGGATC AGTTACTAGA AGCAAGATTA
GTAAGACTAA TAGAAATAAT GAGAAAGGAA TTTACTTAA
 
Protein sequence
MIEKKVIFDI DTKNLNEEGV FYGYASVFDV VDEQGDIISS GAFDLTKCVP LLWQHRQDQP 
IGKVLEMQET EKGLYLKGHI IMEVNQGYEA YKLLKAGVLN GLSIGYIPKK YKMDKHTGAR
VMTAVKLIEV SLVTFPANKY ARVSSVKSQY DADQLLEARL VRLIEIMRKE FT