Gene NSE_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0551 
Symbol 
ID3931686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand+ 
Start bp480515 
End bp481075 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content36% 
IMG OID637900707 
Productmajor surface protein 
Protein accessionYP_506434 
Protein GI88608818 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAATA AAATCGTTTT TGTTTTTAAA TTGCTGAGTG TTGCCTTGCT TTTTGGAATC 
TCATATCAAG CAGAAGGATT CAACAAAGAA ATTACGACCT CACAAATAGA CATAGGTGGA 
ACGTTTAAAC TAACCGATCA GAATGGCGAT CAAGTCACGA ACAACATACT AAAAGGGAAA 
TACACTCTCG TCCTTTTTGG CTTTAGTAGA TGCCCGCATA TTTGCCCAGG ACAATTAACC 
CTTTTGGAAA AAACGCTTGA TGCTTTCCCA AAACTTCAGG CACTTTTTAT TACTCTAGAT 
CCCGCAAATG ATACAGTAGA AGTTCTAAAT AAATTTAGTC GCTCATTTCA CAAGCGAATA 
CTCATGCTTA CAGGTCCGAA TGAGATGATA GAAAAAATTG CCAACGATTA TAAAGTTTAT 
GTAGCAGCGA ATGAGGATCC TGATAAATTC AATCATTCAG CCCTTATGTA TCTTATGGGA 
CTAGATGGTC GTTATATAAG TCATATAGCA CCTCGTAGTG AAGATGAATT ACTCGCATTT 
ATATATCACC ATACAATATA A
 
Protein sequence
MINKIVFVFK LLSVALLFGI SYQAEGFNKE ITTSQIDIGG TFKLTDQNGD QVTNNILKGK 
YTLVLFGFSR CPHICPGQLT LLEKTLDAFP KLQALFITLD PANDTVEVLN KFSRSFHKRI 
LMLTGPNEMI EKIANDYKVY VAANEDPDKF NHSALMYLMG LDGRYISHIA PRSEDELLAF 
IYHHTI