| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0549 |
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| Symbol | pmbA |
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| ID | 3932112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 478825 |
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| End bp | 480198 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637900705 |
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| Product | pmbA protein |
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| Protein accession | YP_506432 |
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| Protein GI | 88608120 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGAATTG AGAGCAAGAT ACTTAAGTTT TATAAAGATC TCAAAAATAC CAAAATGAAC
GTCAAAAATT GCATAGAAGT CATATTAAGC GAAGCAAGAA AACGAGATTG CCAAGCAGAT
TTATTGCTGA CTCAAACTCA AAGCACGATC GCGAACGCAA GAAACTTCGA AATAGAAAAA
CTAGAGGAAT CTTTATTCTC GAGCGTTACG TTTAGACTAA TAAAAGACAA GAAGGTAACC
TCTATAAGAT GTGACCCTTC TGCAGATGTC CGACGCTTAG TTTCCCAAGC ATACGATACA
TTAGCATATA TTCCAGAAAA TGAATACGCT TCACTACCAC AAAATGTGGC AGTAATTGAT
GATATTTATA GTACTCACAC TGACCACAAC TTTCCCGATA AATTAAAGGA GTTGGCAATC
GAAACTGAGC AAATAGCCCA CTCAAATGGG AAACTAAAAA CCACAGAAAC CATTGAATTT
GAAAAAAAAA TCATAAAAAA AATAGTTGCA AATACGAATG GGTTTTCTGG AACTTTTCAA
AACCAACTAT TCTCTGCTGT AGTAGGCGTA GTCGCGGAAA ATGAAGGCAA CCTGAATGCA
GGTTATTCAT ACGTCACTAG CAACTCGCTT AAGGACCTCA TCCCAGCAGA ATTAGCAGCC
GAAGCAGAAA AAAGAGCTAT AGAAGGCCTA AAACCACGGA AAATCCCGAC GTGCAAACGA
GAAGTTATAT TTGATGCAAG GTGCGCTTCG ACTTTTCTCA ACAACTTTAG CAGTTTCCTT
AGTGGCAAAT CAGTTACCCA ATCAGCAACC TTTTTAAAAA ATTATATGGA TAAAGAGATA
CTTCCAAGCA GTATAAACAT ATTGAACAAT CCAGAAGGAG CAAACTGTAA AATCGAAACA
CCAGCCTTTG ATGATGAGGG AAACTACACG AGCAAATGCT TTCCGCTAAT AGAAAAAGGG
ATATTAAAAA ACTGGATACT TGATCAGTAC AACGCCAACA AACTTGGCTT ACAATCAAAT
GGTTTTGCCA AACGCACCCT TAGCGGAAGC ATCCTTCCTT TAGTGACAAA TATTTATCTA
GAAAGCAGCG ATACATATTC TGAAAAGGAA CTGATAAGTA GAATCAAGGA AGGGTTGTAC
GTAACAAGCT TATTTAGCTG CGGTATTAAC CCAATAACCG GAGACTATAG CCAAGGAGTT
CAAGGGTTAT GGATTGAAAA TGGGCAACTT TCGTTTCCCG TGAGCGAGAT TACGATTGCT
GGACAACTAA AAGATGTTTT CAAAGAAATT ATCGCAGCTA ATAACATAAA GTTTTTTGGT
AGAGCGAACT CTCCTTCTCT ATATCTCGGA TTTATGTCTA TTGGCGGAAC ATGA
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| Protein sequence | MRIESKILKF YKDLKNTKMN VKNCIEVILS EARKRDCQAD LLLTQTQSTI ANARNFEIEK
LEESLFSSVT FRLIKDKKVT SIRCDPSADV RRLVSQAYDT LAYIPENEYA SLPQNVAVID
DIYSTHTDHN FPDKLKELAI ETEQIAHSNG KLKTTETIEF EKKIIKKIVA NTNGFSGTFQ
NQLFSAVVGV VAENEGNLNA GYSYVTSNSL KDLIPAELAA EAEKRAIEGL KPRKIPTCKR
EVIFDARCAS TFLNNFSSFL SGKSVTQSAT FLKNYMDKEI LPSSINILNN PEGANCKIET
PAFDDEGNYT SKCFPLIEKG ILKNWILDQY NANKLGLQSN GFAKRTLSGS ILPLVTNIYL
ESSDTYSEKE LISRIKEGLY VTSLFSCGIN PITGDYSQGV QGLWIENGQL SFPVSEITIA
GQLKDVFKEI IAANNIKFFG RANSPSLYLG FMSIGGT
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