| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0546 |
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| Symbol | rrmJ |
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| ID | 3932156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 475908 |
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| End bp | 476549 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637900702 |
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| Product | ribosomal RNA large subunit methyltransferase J |
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| Protein accession | YP_506429 |
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| Protein GI | 88608723 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0293] 23S rRNA methylase |
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| TIGRFAM ID | [TIGR00438] cell division protein FtsJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.597121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAACA AACTTCATCG TGTAGGTAGA TGCACTGCTT CTTCAAGTCG GTGGCTTTAT
AGACACGTTA ATGATCCTTT CGTGAAAAAA GCGAAAGCTG AACAATACAG ATCCAGAGCG
GCATACAAAC TTCTAGAAAT AGATGAAAAG TTTAATCTCA TTCGGAAGGG TTTTGTTGTG
CTTGAGCTCG GAAGTGCACC TGGTGGTTGG AGCCAAGTAA TCGCAGATAT TTTGAATGGT
ACTGGACGGC TAATTGCAGT TGATTTGGCT GATATGGATC CTATTTCTGG GGTTGAGGTC
GTAAAATTGG ATATAGAGTT GCAGCGTAAA GAGCTCTATG AATACATTAG CGGTGTTGAG
TTAGATGTTA TTGTTTCGGA TCTTGCACCA AGCGCTTCTG GCAGCAGAGT CACGGATAGC
ATTTCATCAA TAAGATTGGC TGAGCTAGTT CTGCATTATG CAAAAAACAG CTTGAAGAAG
TTTGGTACAG TGGTAACCAA GATACTTAGA GGTAGTGAGG ACGAATATAG ATTTGTTAAT
TCACTAAGGA AGCAGTTTAA GAAAATAGAG TATTTCAAAC CGGACGCTAG TAGGAAGGCT
TCTCGGGAAA TATACCTTAT TTTGCTTGGT AAGCTTTCTT AG
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| Protein sequence | MKNKLHRVGR CTASSSRWLY RHVNDPFVKK AKAEQYRSRA AYKLLEIDEK FNLIRKGFVV
LELGSAPGGW SQVIADILNG TGRLIAVDLA DMDPISGVEV VKLDIELQRK ELYEYISGVE
LDVIVSDLAP SASGSRVTDS ISSIRLAELV LHYAKNSLKK FGTVVTKILR GSEDEYRFVN
SLRKQFKKIE YFKPDASRKA SREIYLILLG KLS
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