Gene NSE_0543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0543 
Symbol 
ID3931372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp472503 
End bp473567 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content38% 
IMG OID637900699 
Producthypothetical protein 
Protein accessionYP_506426 
Protein GI88608434 
COG category[R] General function prediction only 
COG ID[COG4976] Predicted methyltransferase (contains TPR repeat) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.395054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTAATT CGTTTCTTCT CTTCCTATCG CGGATCTACC GAGAGATTTC CGATTTGTTC 
ACGCGGTTCT GTGGTCTCTT TGGAGAGAAG GAGAAGTTTT ATAAAGTAAT TAAGGATAAC
CTTCACTCTT CTTCCAATTT CAGAGAGTTT TATAAAAATA ATGTTTCTCT AGGTCTTTAT
CATTTCTACA GAGGTAATCT TAGTGATGCT AAGTTTCGTT TTAAGATGCT TAATAGTTTG
TACCGGAATA AACCATTGAT TCCGTATAAT CTGGCTAGAT GCTTTTTGAT CTCCGGAGAA
ACGAAGAAGG CTAGGGCTAT ATTTGAGAGC ATTATCTCCA AAGGGAGAGA ATATGAGGAA
GTGAGGTTCT TTTTAGATTT TCTTAATGGT CAAAAAATAA ATAGGATCCC GAACTTCATT
GTTAAAGAAA GATTTGAACA CTTGGCGCAG GAGTATGTTG AGAGGTTTCT TATAGGTAGA
AGGTACATTG GACATAAGCT TATTTTTGAA GGGCTGAAAG CGATCATCGG TACTAAGCTT
ACTTCTGATG AGCTTTCGAT TTTGGATCTT GGTTGTGGAA CAGGTGTTTG CACACATTTC
CTCAAATTAA GTGGTGTAGT GGGCGAGGCA ACAGGTGTTG ATATATCAGA AAACATGTTG
GAAATCGCAA AACGATGTTT AGTTGATGGA AAGCCGGTTT TCAGTTCAGT TATCTGTAAT
GACATAAAGT CATTCCTTCT TTCTCAAGAG AATAACTACG ATCTTGTGAT AGCAGCTGAT
TCTTTTTCTT ACCTTGGTGA TTTATCGGAT GTTATATCGA GTTGTATTAC TATCTTGAAA
GATGGAGGTG TACTAGCAGT GTTGGTGCGT GCAGCAAGGC AACAAGAGGT TCATGATTAT
GTCTTCGATG TTAATAGATC TCTATTCTAT TACTCCTATG ACTACATGAA AAATCTGGGT
GAAGGTCTTG CTCTGAAAAA TTGCATAGTT AGAAGGTGTA CTTTCAAAAG TGCATGCAGC
GGAATCATGG CGTTCTATGT CAAGGGCGAT TGTGCCATCT CTTAG
 
Protein sequence
MFNSFLLFLS RIYREISDLF TRFCGLFGEK EKFYKVIKDN LHSSSNFREF YKNNVSLGLY 
HFYRGNLSDA KFRFKMLNSL YRNKPLIPYN LARCFLISGE TKKARAIFES IISKGREYEE
VRFFLDFLNG QKINRIPNFI VKERFEHLAQ EYVERFLIGR RYIGHKLIFE GLKAIIGTKL
TSDELSILDL GCGTGVCTHF LKLSGVVGEA TGVDISENML EIAKRCLVDG KPVFSSVICN
DIKSFLLSQE NNYDLVIAAD SFSYLGDLSD VISSCITILK DGGVLAVLVR AARQQEVHDY
VFDVNRSLFY YSYDYMKNLG EGLALKNCIV RRCTFKSACS GIMAFYVKGD CAIS