Gene NSE_0509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0509 
Symbol 
ID3931399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp429441 
End bp430142 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content38% 
IMG OID637900665 
ProductCcmC family heme exporter protein 
Protein accessionYP_506393 
Protein GI88608519 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID[TIGR01191] heme exporter protein CcmC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0176154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA ACTTCCTCGA CACCAGTATA TCAAAAAAGT GTATTTTTAG CTTGATGTTC 
GCTTTATGCG TTTTATATTC ATTCGCTTTT TATTTTGTAT TTTCGTCTCC TATTGACCAA
TTACACGGTA ACTTGGTACG AATCATGTAC ATTCACGTTC CCGCTGCTTG GCTCGGTGTA
GGCCTGTACT GCGTCATTGG GCTACTGAAT TTACTCTATT TATCCTTTTC TCTACCAAGG
CTTGGTGTAA TTGCATATGC ATTGGCACCA ATCGGCATGG TTTTTTCCTT AATCTGTCTG
ATTACAGGAG GTCTCTGGGG AAAACCAATA TGGGGAGCAT TTTGGGTATG GGATGCTAGA
TTAACATCAA TGTTAGTTCT CTTCTTTTTA TATTTGGGTT ACTACATACT CTGGGACTAC
AAGGAATTTA ACATCAAATT GGCCGCTATA CTTAACTTAG TTGGTTTGGC AAATATCCCG
ATCATCAAAC TCTCAGTGTA TTTTTGGGCA ACATTACATC AGAAATCCAG TTTTATAAGA
AGTGGTGGTA TATCAATCCA TCCATCCATG CTTACGCCTT TGTTGTTGAT GTTTCTAGCA
TCCTTTGTGT TGACACTGCT ATTATGGTAT TTTAACGCTC GTGCAACTTT GAACTTAAAG
AAAATAGAGA AGCTGCTTTT GTATGAGAAG TCTACTGAGT AA
 
Protein sequence
MKKNFLDTSI SKKCIFSLMF ALCVLYSFAF YFVFSSPIDQ LHGNLVRIMY IHVPAAWLGV 
GLYCVIGLLN LLYLSFSLPR LGVIAYALAP IGMVFSLICL ITGGLWGKPI WGAFWVWDAR
LTSMLVLFFL YLGYYILWDY KEFNIKLAAI LNLVGLANIP IIKLSVYFWA TLHQKSSFIR
SGGISIHPSM LTPLLLMFLA SFVLTLLLWY FNARATLNLK KIEKLLLYEK STE