Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0509 |
Symbol | |
ID | 3931399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 429441 |
End bp | 430142 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637900665 |
Product | CcmC family heme exporter protein |
Protein accession | YP_506393 |
Protein GI | 88608519 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0176154 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA ACTTCCTCGA CACCAGTATA TCAAAAAAGT GTATTTTTAG CTTGATGTTC GCTTTATGCG TTTTATATTC ATTCGCTTTT TATTTTGTAT TTTCGTCTCC TATTGACCAA TTACACGGTA ACTTGGTACG AATCATGTAC ATTCACGTTC CCGCTGCTTG GCTCGGTGTA GGCCTGTACT GCGTCATTGG GCTACTGAAT TTACTCTATT TATCCTTTTC TCTACCAAGG CTTGGTGTAA TTGCATATGC ATTGGCACCA ATCGGCATGG TTTTTTCCTT AATCTGTCTG ATTACAGGAG GTCTCTGGGG AAAACCAATA TGGGGAGCAT TTTGGGTATG GGATGCTAGA TTAACATCAA TGTTAGTTCT CTTCTTTTTA TATTTGGGTT ACTACATACT CTGGGACTAC AAGGAATTTA ACATCAAATT GGCCGCTATA CTTAACTTAG TTGGTTTGGC AAATATCCCG ATCATCAAAC TCTCAGTGTA TTTTTGGGCA ACATTACATC AGAAATCCAG TTTTATAAGA AGTGGTGGTA TATCAATCCA TCCATCCATG CTTACGCCTT TGTTGTTGAT GTTTCTAGCA TCCTTTGTGT TGACACTGCT ATTATGGTAT TTTAACGCTC GTGCAACTTT GAACTTAAAG AAAATAGAGA AGCTGCTTTT GTATGAGAAG TCTACTGAGT AA
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Protein sequence | MKKNFLDTSI SKKCIFSLMF ALCVLYSFAF YFVFSSPIDQ LHGNLVRIMY IHVPAAWLGV GLYCVIGLLN LLYLSFSLPR LGVIAYALAP IGMVFSLICL ITGGLWGKPI WGAFWVWDAR LTSMLVLFFL YLGYYILWDY KEFNIKLAAI LNLVGLANIP IIKLSVYFWA TLHQKSSFIR SGGISIHPSM LTPLLLMFLA SFVLTLLLWY FNARATLNLK KIEKLLLYEK STE
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