Gene NSE_0467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0467 
Symbol 
ID3931444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp383147 
End bp385870 
Gene Length2724 bp 
Protein Length907 aa 
Translation table11 
GC content37% 
IMG OID637900623 
ProductATP-dependent DNA helicase UvrD 
Protein accessionYP_506352 
Protein GI88608144 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA AAGTTACTGA TCCTAATGTC TCAGTCTGGA TTAATTCATC CGCCGGTTGC 
GGCAAAACCA CCTTGCTTGT AAGAAGAGCC ATATCATTAC TGGTTAACAA AGAGAAGAAT
ATACTGTGCA TAACTTTTAC AAAGGTAGCA ACAGCAGAAA TGCACAACCG CATTTTCGCT
ATATTAGGAA AGCTCTCCGC AATGAATGAT ACAGATATGG ACGAGTATTT GCTTTCCACG
ATTAATAGAA CTGTGAAAGA TCGGGATTAT GTCCGGAAAC TTGTGTACAC AGCCGACGCA
TTTATCCAAA TACAGACATT ACACTCCTTC TGCTGGCAAT CCATTAAAAT GTGTGACCGA
CGACATCTTT CAAAAGAAAT ATATGAGGAA AACCAACACA TGTTCTGCCA ATTACTGGCA
CGGTTTATTT GGGAAAGATG TCAACTTTCC AAGAAAACCG CAGAAAAGAC AACCGAAAGA
AAATTGCATG AAACGCTAGC ATCTTTGCTA AGTAACTTTC ACCTAGACTA CAGAAAAATA
ATCGAGAAAC TTAAGAATGA TCCACTAGAA CAATTGGCAA CGGAGAGTAT AGATATATTA
TCGGCATTCA CTCAATTTTT AGAAATTAAT CAAAATATCT CGAAACACTA TATTTCCCAT
AATGGAATCA TAGAGACTGC GATAGAGATG GAAATATGGA ATGTTTATGA AATTGCTGCG
AAAATAGACC ATATCCTGCT CGATGAAGCG CAGGACAATA GCATAAAACA GTGGTATATC
ATATCTAATC TCTGTAGGGA TTTTCTCATA GATGAAACAC ATAATAAGAG CATCTTTGTA
GTTGGTGACT ACAAACAGTC CATTTATGGG TTTCAGGGGG CGAGTCCCGA GATGTATCTT
GCGTTTTACG ACATACTTAA ACAAAGGGAT CCCCAAAATA AGCTTGTTCA GGTTAAGACA
GCAAAGTCCT ATAGATCATC TACAGCTATT CTACAATTTG TTGACAGCGT CTTTGAAAAC
ATCCAACTTT GTAAAACATC CAGTGAGAAG ATTCGCCATA CCACAAGTAG AACTGAAGCG
CCGGGCTATA TAGAAGTAAT ACCATTGCTA CAATATGGAG AAGTTGATGC AGAACTTCAA
CTGGCAATTT CTATAAGGGA AACCATACAA AGTTGGCTTA AGATAGGTAG AACACTTAAA
GCAAAAAACA GACCTGTAAA AGGAAGTGAC ATATTGATCC TTGTTGCACA CAGAACCAAT
TTGGTTGACC ATATTTACAC GCAACTTACT GCCATTAATA TCCCGGTGAA TTTTACAGGC
AAATTCACAG TAAAAAACAA TCCCTTGTTC GAGCTTCTCA TAAATCTAGG AAAGTTTCTC
ATCTATAAAC ACGATGATGA AGCTCTGATC ACACTTTTGA AATCTCCTAT ATTTGCCTGG
AGCCACAGTG CTCTACTAAA ACTTAAAGCT GAGAAAAAAA AGGAATGGTT GTTCGAGCAG
ATTTGTGCCA CATACGCAGG AAAAGTACTT AAGAGGTGGC TTGAATTCTA TGGCACGACT
TTCGACATAT ATTCACAGGT TCTTGACGCA AGGACTGTCA CCACATTAGC CAAATACTAT
GGAAGTGAAA CCCCCTATTA TATTGACATC TTTTTAGACA ACACGCTCGA ACACGAATGT
ATACATGATT TTATTTACAT CTTTTCTGGC GAAGACGCGA CTTTAAAAAT CAAAAGCAAG
AACGAAAACG GTGTTACTAT CTCAACCGTT CATGGAAGTA AAGGTACGCA ATCACCTATT
GTGTTTATAG TGGATAGTAA TTACGTACCA CAAAATCGTG ATATTTTTTT CTTTACTGAA
GACGGAACAC CACTCCTCTC ATCTGAAACC CATGTTAGAG TCGTACAAGA AATGAGGGAT
GTAAAAAAGG AATCGATCCG ATATGAACAT CTGAGACTCC TCTACGTTGC CTTAACACGT
GCGGAAGATG AATTGTACAT TATGGGAATT GGCAAACAAG CCAAAAAGAA TTCTTGGTAT
GAAGCATGCA GCAACGGAAT CGTAAAAATA GGCTCACAAA ATCAAGATGG AGCGTATTAC
TACACAAATG ATCTCCTGTA TCCTATAAAA ATTAAACAAA AGGTAGATAA ATCAGACGAA
AACCCCAGTC TACATAGAGA AAGAGATAGC AACCGTCGCA TGAAAAATAC GCAAGAGCTA
CAAAACAAGG AAAGTGATTT AGCAAACTCA TATGAATTTC CTTACAAAAG AGATGAAACA
TTTGATAATG GCATCATAGA TGATGATGTA ACAAAAGTTT CTGAGAAGAC CTTTCAGATC
ATCCGTGGCA AATTAATACA CAAGATTCTC GAATACATTT CTAAAGTTGA AAAAGCTGAA
AAATGGATGA ATTTATTCCT GGAAGAGTAT TCTCCAGAAT TATCGAACGA GCAAAAAAAT
GAAATCAAAA GGACGGTTTT GCTTTTTCTT GAAAAGAATC ATAGAGCGGA CGGTAAAAAC
GAGGTAGAAG TCTATTTTGA TGGTAAGCTA CTCAGAATGG ATAATGTGAA ATTCGAAAAG
GATACAATAA CGATTAGAGA TTATAAAACT GGAAAAGATA AAAGCGTCGA TCTTGCAATA
GAAAAGCAAA TGCATCGATA TAAAGAAGCT ATGCAAGCAA TCTATCCAGA AAAGAATGTA
ATAACTGAAA TAATTTGGCT TTAA
 
Protein sequence
MIEKVTDPNV SVWINSSAGC GKTTLLVRRA ISLLVNKEKN ILCITFTKVA TAEMHNRIFA 
ILGKLSAMND TDMDEYLLST INRTVKDRDY VRKLVYTADA FIQIQTLHSF CWQSIKMCDR
RHLSKEIYEE NQHMFCQLLA RFIWERCQLS KKTAEKTTER KLHETLASLL SNFHLDYRKI
IEKLKNDPLE QLATESIDIL SAFTQFLEIN QNISKHYISH NGIIETAIEM EIWNVYEIAA
KIDHILLDEA QDNSIKQWYI ISNLCRDFLI DETHNKSIFV VGDYKQSIYG FQGASPEMYL
AFYDILKQRD PQNKLVQVKT AKSYRSSTAI LQFVDSVFEN IQLCKTSSEK IRHTTSRTEA
PGYIEVIPLL QYGEVDAELQ LAISIRETIQ SWLKIGRTLK AKNRPVKGSD ILILVAHRTN
LVDHIYTQLT AINIPVNFTG KFTVKNNPLF ELLINLGKFL IYKHDDEALI TLLKSPIFAW
SHSALLKLKA EKKKEWLFEQ ICATYAGKVL KRWLEFYGTT FDIYSQVLDA RTVTTLAKYY
GSETPYYIDI FLDNTLEHEC IHDFIYIFSG EDATLKIKSK NENGVTISTV HGSKGTQSPI
VFIVDSNYVP QNRDIFFFTE DGTPLLSSET HVRVVQEMRD VKKESIRYEH LRLLYVALTR
AEDELYIMGI GKQAKKNSWY EACSNGIVKI GSQNQDGAYY YTNDLLYPIK IKQKVDKSDE
NPSLHRERDS NRRMKNTQEL QNKESDLANS YEFPYKRDET FDNGIIDDDV TKVSEKTFQI
IRGKLIHKIL EYISKVEKAE KWMNLFLEEY SPELSNEQKN EIKRTVLLFL EKNHRADGKN
EVEVYFDGKL LRMDNVKFEK DTITIRDYKT GKDKSVDLAI EKQMHRYKEA MQAIYPEKNV
ITEIIWL