| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0446 |
|---|
| Symbol | |
|---|
| ID | 3932245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 363071 |
|---|
| End bp | 363745 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637900602 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | YP_506331 |
|---|
| Protein GI | 88608593 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAGG GAAAAATAGT CTTAGTAACT GGTGCGTGTA ACAGGATTGG TGCATCTATA
GCGCGAAGGT TCGCGTCGGA AGGGGCTTCT CTAATCCTGC CTGTAGCAGA TCTATCAGAT
CTTGATGAGC TAAATCAGGA CATAAAAAAA TTGGGAGGAG AATCGATTCT GGTGCAAGCA
GATATATTGG ATGTTTCTCA GATGGAGTCG CTTAAAAATG CTATCTCAGG TACCTCAAAA
AAGTTAGATG TTCTTATCTC TACCCACTTC TATACTAGTG AGCCTAACCT CTTAGTGGAT
TATGAAGTTG ATGAGTGGAG AAGAATAGTA GAAGAAAATT TCTCCTTAAA TTGGTATATG
TTAAAGAACT TTGATGGGCT TTTGAAACGG TCTGAGCATG GTAGAGTAGT TTTTCTTTCT
CTTGAGAGAA TTGTTGGAAA AAATCCTTTA TACTTTTCCC CGTACGTTGC AAGCAGTGCA
GCCCTTGCTC AGCTTATGAA AGGATATGCT AATGATGTTC TAAATTATGG GATGTGTGTG
AACATGGTTG CTCTTGAAGG ATACGAGGAG GATATTTCTG TGGAACCTCA GCCCAAATGT
GCGGAACTTT TCCTTAGTTT GAGCTCAGTA CAGTGTAAGA TTTCTGGCAG AAAGCATTAT
GTTTCTTACA CTTAA
|
|---|
| Protein sequence | MLQGKIVLVT GACNRIGASI ARRFASEGAS LILPVADLSD LDELNQDIKK LGGESILVQA
DILDVSQMES LKNAISGTSK KLDVLISTHF YTSEPNLLVD YEVDEWRRIV EENFSLNWYM
LKNFDGLLKR SEHGRVVFLS LERIVGKNPL YFSPYVASSA ALAQLMKGYA NDVLNYGMCV
NMVALEGYEE DISVEPQPKC AELFLSLSSV QCKISGRKHY VSYT
|
|---|
| |