| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0438 |
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| Symbol | ispH |
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| ID | 3932177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 356761 |
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| End bp | 357672 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637900594 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_506323 |
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| Protein GI | 88608647 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.429334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAATAT TCGTTGCCTG CCCTAGGGGC TTCTGCGCAG GGGTGGAACG TGCAATAGAA
ACAGTTGAGA TAGCAATAAG AAGATATCCA GAAAAAAAAA TTTTTGTCTA CCATGAGATA
GTCCATAATT CCCGCGTTAT ACAGGATTTC AAAGCACGAG GTGTGGATTT TATAGAGGAC
ATCACTAAAG TAGAACCAAA GTCAGTATTG ATTTTTAGCG CACACGGTGT TTCTGAAGAA
ATTGAAAAAT ACGTAAAGTC ACTAGATTTA GTGCTTGTGG ATGCAACCTG TCCACTGGTC
TCAAAAATAC ATCGTGAAGT TCAAAGATTT GAAAAAGAAG GTTTTATTAT TCTAGTCATA
GGAAATAGAA ATCATGCTGA AATAATCGGA ACAGTTGGAA GAACTAAAAC ACAAGCCTAT
ATCGTCCAAG ATCCTGAAGA TATAGATAAT CTCCCCTCAA TAACTGGAAA GTTGGCATAC
GTCACACAGA GTACACTTGC GCTTGAGTAC ACATCAACAA TGATAAACAA GATAAAAGAA
AAGTTCCCAA ATGTGGTTGG ACGGTCTGAT GTATGTTATG CGACTCAAAA CAGACAAGAA
GCTGTTAAAG CACTTGCCAA AGAAGTGGAT CTGATGTTGA TAGTTGGTTC TACCAACAGT
TCTAATTCAA GGAATCTAAT GCAGGTCTCA TCAAAGATAT GCCAAAAAGC ATTTCTCATA
GATAATTACA ACGAAGTCGA ACCCGATTGG TTTGAAGGAG TAGACAGAGT AGGAATCAGT
TCGGGTGCTT CTGCTCCGGA AATACTTGTA CAAGATCTTG TATCATTTTT GAAAAAAAGA
TTTCCTTCTG CAGAAGTTTC AGACTTCAAA TTTAAGGAAG AGAAAGTGCA ATTCAAGCTC
CCAATTATAT AG
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| Protein sequence | MQIFVACPRG FCAGVERAIE TVEIAIRRYP EKKIFVYHEI VHNSRVIQDF KARGVDFIED
ITKVEPKSVL IFSAHGVSEE IEKYVKSLDL VLVDATCPLV SKIHREVQRF EKEGFIILVI
GNRNHAEIIG TVGRTKTQAY IVQDPEDIDN LPSITGKLAY VTQSTLALEY TSTMINKIKE
KFPNVVGRSD VCYATQNRQE AVKALAKEVD LMLIVGSTNS SNSRNLMQVS SKICQKAFLI
DNYNEVEPDW FEGVDRVGIS SGASAPEILV QDLVSFLKKR FPSAEVSDFK FKEEKVQFKL
PII
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