Gene NSE_0423 details

Gene Information

• Locus tag: NSE_0423
• Symbol: ftsH
• ID: 3931660
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: -
• Start bp: 345354
• End bp: 347264
• Gene Length: 1911 bp
• Protein Length: 636 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637900579
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_506309
• Protein GI: 88608851
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGAAAC TTTTAGAAAA CCTTTCTCTC TGGATGGGGA TAATAATCCT TGTAACTCTT 
CTGTTTGGAC AGGTTGCATT GAACTTTGGT TTTGGGGTCA GAAATGAGAA AATACAGTTT 
TCAGAATTTT TGGACCTGGT AGAGAAAGGG GAAGTCCAGA AAATAGTCAT AGAAGGTTAT 
GACATATCGG GTGTGTTAAA AAGCGGAACG CATTTTTACA CCAAAGCTAC TCAGTACACA 
GAACTGATTC CACTTCTAAG AAAAAATAAT GTTGACTTTC AGGTAGCTTC TGGAGACAGC 
TTCCTGGGTT TACTCTTCAA CATTCTCATA TCTTGGTTTC CAATGCTTCT TTTAATCGGT 
GTGTGGATCT TTTTTATGAA GCAGATGCAA GCCGGGGGCA ACAAGACCAT GACCTTTGGA 
AAATCAAAGG CAAGACTTCT GAGTGACAGA AGTAATAAAG TGACTTTCCA TGATGTTGCA 
GGGATAGACG AAGCAAAGGA AGAACTCGCT GAGATTGTTG AGTTTTTGAG GGAACCAAAG 
AAATTTCAAA AATTAGGCGG AAAAATCCCT AAGGGGTGTT TATTAATAGG ACCTCCAGGT 
ACCGGTAAAA CATTGCTGGC TAAGGCAATT GCTGGAGAAG CAAAGGTTCC GTTTTTCAGC 
ATCTCTGGTT CAGATTTCGT TGAGATGTTT GTCGGTGTTG GCGCAAGTAG GGTCAGAGAT 
ATGTTTGAAC AGGGCAAAAA GAATGCCCCA TGCCTAATAT TCATAGACGA GATCGATGCA 
GTTGGACGTC ACCGTGGAGT TGGATTCGGT GGCGGTAATG ATGAACGTGA ACAAACCCTG 
AATCAGCTCT TAGTCGAGAT GGATGGTTTT GAAGCAAATG AGGGCGTCAT TATTATTGCT 
GCAACGAATA GGCCAGATGT GCTTGACCCT GCTCTGTTAC GACCAGGTAG ATTCGATAGA 
CAAATAACAA TTTCTATTCC TGATATAGCA GGAAGACAAA AAATATTGGA AGTTCACTTA 
AAAAAGATTC CTACAGCACC AAATGTGGAG GTTTCAATCA TAGCACGAGG TACGCCTGGC 
TTCTCTGGCG CAGATCTTGC AAACCTAGTC AATGAGTCAG CACTTATCGC GGCTCGTAGG 
AACAAGAAAG TAGTAACTAA TGAGGATTTT GAATACGCAA GAGATAAAAT ACTCATGGGA 
ATGGAAAGAA AATCTCTTGT CATGAGAGAA GAAGAAAAGT TACTGACTGC CTATCACGAA 
GCGGGACATG CTATTACTAG TCTAAAACTT GAAGCATCTG ATCCAATACA TAAAGCAACT 
ATTATCCCGC GTGGACGAGC TCTGGGACTT GTGATGCGAC TCCCTGAACA TGACCGTGTT 
TCCTTTACCA GAGCGAAGAT GCACGCCGAT TTAATTGTTG CGATGGGTGG AAGAGCTGCT 
GAGCAGGTAA TTTTTGGAGA TGATAAGACC ACCAGTGGTG CTGCTTCAGA TATTAAACAA 
GCAACTCATC TCGCAAGATC AATGGTTACA AAGTGGGGAA TGAGTGAAAA AGTCGGTCCA 
CTCCTTTATG GTGAACAAAA TGATCCAAAT AATCATATCC TTTCAATTGA GATGTCTAAT 
CTCATTGATA GTGAGGTGAA GCAACTTGTT ACAGATGCCC TTAAAGAAGC CACTAAAATC 
CTCAATGAGA ATATAGAATC ACTTCATCGG GTAGCAAAAG CATTGCTTGA GTATGAAACC 
CTTACAGGAC AGGAATTATC TGATCTACTT GAAGGAAAGT CATTCCTCAA AAAGGCTCCT 
GATGATAAAA AGGTTGTTTC TAAATCTTCA TTAGACGTTG AAGATGATAC AGTAGATAAG 
GAAACATTGG AAAAATTGGA ATCCGATCTT GATGCTGGAG ACAAGGAATG A 

 

Protein sequence

MKKLLENLSL WMGIIILVTL LFGQVALNFG FGVRNEKIQF SEFLDLVEKG EVQKIVIEGY 
DISGVLKSGT HFYTKATQYT ELIPLLRKNN VDFQVASGDS FLGLLFNILI SWFPMLLLIG 
VWIFFMKQMQ AGGNKTMTFG KSKARLLSDR SNKVTFHDVA GIDEAKEELA EIVEFLREPK 
KFQKLGGKIP KGCLLIGPPG TGKTLLAKAI AGEAKVPFFS ISGSDFVEMF VGVGASRVRD 
MFEQGKKNAP CLIFIDEIDA VGRHRGVGFG GGNDEREQTL NQLLVEMDGF EANEGVIIIA 
ATNRPDVLDP ALLRPGRFDR QITISIPDIA GRQKILEVHL KKIPTAPNVE VSIIARGTPG 
FSGADLANLV NESALIAARR NKKVVTNEDF EYARDKILMG MERKSLVMRE EEKLLTAYHE 
AGHAITSLKL EASDPIHKAT IIPRGRALGL VMRLPEHDRV SFTRAKMHAD LIVAMGGRAA 
EQVIFGDDKT TSGAASDIKQ ATHLARSMVT KWGMSEKVGP LLYGEQNDPN NHILSIEMSN 
LIDSEVKQLV TDALKEATKI LNENIESLHR VAKALLEYET LTGQELSDLL EGKSFLKKAP 
DDKKVVSKSS LDVEDDTVDK ETLEKLESDL DAGDKE