Gene NSE_0411 details

Gene Information

• Locus tag: NSE_0411
• Symbol: nrdA
• ID: 3932191
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: -
• Start bp: 336154
• End bp: 337971
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637900567
• Product: ribonucleotide-diphosphate reductase subunit alpha
• Protein accession: YP_506298
• Protein GI: 88608409
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0209] Ribonucleotide reductase, alpha subunit
• TIGRFAM ID: [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.348593
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGATC CTTCCCCTAT TTTTCATCAT GATCATGATG AAAAAAAAAT CCATACACTG 
CATGCAAGGG ACTCCTTTCT TACAGATTTC GGAAAGGCAG TTCTCAAGGA TAGATATTTG 
CAGAATGGCG AAGATTACCA GGGCCTTTTT GCAAGAGTAG CTAAATATTA CTCCGATGAC 
CCGAAACATG CATGTAGACT GTACGACTAT ATGAGCAACT TATGGTTCAT GCCTGCTACA 
CCTATTCTCA GCAATGGTGG TACAAGTCGT GGACTCCCGG TTTCATGCTT CCTCAATGAA 
ACAGAAGACT CATTGGAGGG AATTGTCGGA CTCTGGAATG AAAATGTATG GCTCGCGTCA 
CATGGTGGCG GGGTCGGAAG TTACTGGGGT AACCTGCGCT CAATAGGAGA AAAAGTAAAA 
TGTAGTGGTA AGACTTCGGG AATTATTCCG TTTATTGTTG TACAAAATGC ACTAACTCTT 
GCAATATCAC AGGGTTCACT TAGGCGTGGA AGTTCAGCCG TTTACTTACC AGTAAACCAT 
CCGGAAATTA TCGAATTTAT AGACCTCAGA AAACCAACAG GTGGTGATCC AAATAGAAAA 
GCACTTAATT TGCATCATGC AGTCGTTATC AATGATGACT TCATGAAAGC TGTCCTAGAG 
GATAAAGAGT GGGATCTTAT CAGTCCAAAG GACGGTTCCG TGATAGCAAC AGTCGGAGCA 
AGGGGTATAT GGATAAGAAT ACTTACAGCC CGTCTCGAAA CCGGTGAGCC ATATATTCTG 
TTTATTGACA CAGTCCAGAG ATTAAGGCCC GATGTATATA AAAACCTTAA TCTCGATGTC 
AAAATGTCGA ACCTATGCAG CGAGATAACA CTTACAACGG GTAAAGATCA CCTCGATAAT 
CATAGAACTG CTATTTGTTG TCTTTCTTCC CTAAATTTAG AAAAATTTGA TGAATGGGAG 
CATAATGAGC AATTTGTACG GGACGTGATG CATTTCTTGG ACAACGTGCT GGAGGACTTT 
ATTAGAAAAG CACCTGATTG CATGCACAGA GCAAGATATT CTGCCATGCG AGAAAGAAGT 
ATAGGCTTGG GTGTAATGGG GTTTCACTCC TTCCTGCAAA GTAAGGGTAT TCCGTTTGAA 
TCGGCAATTG CGAAAAGTGT TAACCTAAAA ATTTTTAAAA AAATTAAACA CGAAGCAGAT 
AAGATTTCGA AAGAAATGGC ACTAGAGAGG GGTCCTTGTA AGGATGCAGT GGATTGCGAT 
ACTATGGAGC GGTTTGTCCA TAAGATCGCT GTTGCGCCAA CAGCATCCAT CTCGATCATT 
GCGGGTAATA CTTCACCAGG TATTGAACCA TACGCAGCAA ATGTTTTCAC ACAAAAAACT 
TTAAGTGGAT CTTTCGTTGT CAAGAATAAG CATCTCGCTG CCCTCCTAGA ACGCAAGGGA 
AAAAATACGG ACTGTGTATG GTCCTCTATT ATTTCTAATG AGGGCTCTGT ACAGCACTTA 
GACTTTCTCG ATGAGAATGA AAAGATGGTT TTTCGAACAG CATACGAAAT GGACCAACGA 
TGGGTTATCG AACTCGCCGC TGATCGTACA CCCTATATAT GCCAATCCCA GTCAGTAAAT 
CTCTTTCTAC ACTCTAACAT ACACAAAAAA GAACTAAGTA ATCTACACTT TCTCGGATGG 
AAAAAAGGCC TAAAAAGCCT TTACTATTGC CGGTCAAAAT CCATACAGCG TGCATATAAA 
ATATCACAGG AATACAAACA TAAAAGTGAT ACTCCTTCTC CTGTTGGTGA ATCAGATGAT 
TGCATCGCGT GCCAATAG 

 

Protein sequence

MLDPSPIFHH DHDEKKIHTL HARDSFLTDF GKAVLKDRYL QNGEDYQGLF ARVAKYYSDD 
PKHACRLYDY MSNLWFMPAT PILSNGGTSR GLPVSCFLNE TEDSLEGIVG LWNENVWLAS 
HGGGVGSYWG NLRSIGEKVK CSGKTSGIIP FIVVQNALTL AISQGSLRRG SSAVYLPVNH 
PEIIEFIDLR KPTGGDPNRK ALNLHHAVVI NDDFMKAVLE DKEWDLISPK DGSVIATVGA 
RGIWIRILTA RLETGEPYIL FIDTVQRLRP DVYKNLNLDV KMSNLCSEIT LTTGKDHLDN 
HRTAICCLSS LNLEKFDEWE HNEQFVRDVM HFLDNVLEDF IRKAPDCMHR ARYSAMRERS 
IGLGVMGFHS FLQSKGIPFE SAIAKSVNLK IFKKIKHEAD KISKEMALER GPCKDAVDCD 
TMERFVHKIA VAPTASISII AGNTSPGIEP YAANVFTQKT LSGSFVVKNK HLAALLERKG 
KNTDCVWSSI ISNEGSVQHL DFLDENEKMV FRTAYEMDQR WVIELAADRT PYICQSQSVN 
LFLHSNIHKK ELSNLHFLGW KKGLKSLYYC RSKSIQRAYK ISQEYKHKSD TPSPVGESDD 
CIACQ