Gene NSE_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0409 
SymbolsppA 
ID3931385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp333406 
End bp334332 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content44% 
IMG OID637900565 
Productsignal peptide peptidase SppA, 36K type 
Protein accessionYP_506296 
Protein GI88608447 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.927346 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTT TGGGTGATGC GTTTGTCGAA AATTTTAGCT TAAGGAAGAG GTTAACTTTT 
TGGAAAGTGG TCACATTTGC TCTGATTGCT CTCCTCTTGA TTGTTTCGGG TTCTTCTTTT
CGTGGTGGCT TTTTCGACAG TTTTTCCACC CCGTACATAG GTAGGGTGGT CTTTTCTGGG
GTTATAGATC AAGATCTTGC AAGAAATAGC CAGTTTGCTT CTTTTGCGGA CAATCCTAAA
ATAAAAGCAA TAATCCTTCA CGTAGACAGC GGAGGTGGGG GAGCGGCCGC TTCTGAAGCG
CTTTACAACG TTGTTAGGAG CGTGTCTCAA GTTAAGCCGG TTGTGATTGT AGCCAACGGA
ATAATGGCTT CTGGTGCGTA CATGGTAGCA ATGGCTGCTG AACATATAGT CGCATACAAT
ACTAGTATTG TCGGTTCGAT TGGTATGATA TTACAAGCCC CGAATTTTTA TGAGATCGGA
AAGAAAGTTG GGGTAAAAAT GGACGTTGTT CGTTCTGGTA GATTGAAAGC CTTCCCATCT
ATTTTGGAAG AATTTACCAA AGAGGCGCGT TTGGCTATGG AGCACTCCAT CAGCGTCGCT
AACGAGCACT TTTTATCTAT GGTACAGGAG CGCAGAAAGA TTACAGATGC CCGTGTGATG
TCCGAGATTG CGACAGGTAA GATCTTTACC GGCAGGGAAG CGCTTGAGTT TTCCCTGGTT
GACGAGATAG GTGATGAGGG AAATGCGGTA AGGTGGCTGA AGGAAAGGGG AATTACGGGA
AAAATACGTG ATCTTGGTTT TGTTTCAGGT AAGGGTTTTC GTGTAGGTAA GATTCCCCCA
TCTTCTTATC TTTCCATTTT AAATGAGTTT TTCCATTACT TGTGTTCTCC AGGGCTTCTT
GCCGTTTTTC CGGGTATCTC TACTTAG
 
Protein sequence
MDFLGDAFVE NFSLRKRLTF WKVVTFALIA LLLIVSGSSF RGGFFDSFST PYIGRVVFSG 
VIDQDLARNS QFASFADNPK IKAIILHVDS GGGGAAASEA LYNVVRSVSQ VKPVVIVANG
IMASGAYMVA MAAEHIVAYN TSIVGSIGMI LQAPNFYEIG KKVGVKMDVV RSGRLKAFPS
ILEEFTKEAR LAMEHSISVA NEHFLSMVQE RRKITDARVM SEIATGKIFT GREALEFSLV
DEIGDEGNAV RWLKERGITG KIRDLGFVSG KGFRVGKIPP SSYLSILNEF FHYLCSPGLL
AVFPGIST