Gene NSE_0404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0404 
Symbol 
ID3931598 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp328184 
End bp329476 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content40% 
IMG OID637900560 
ProductCBS domain-containing protein 
Protein accessionYP_506291 
Protein GI88608860 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGGTT TATTACTTTC GTTGCTTGCT TTATTACTTT TCTTAGCTCT CCTTTTGTCC 
TGTGTGTTCT CAGGTGGTGA GACTGCTATA ACAGTTGTAA ACCCAGCTAA ATTGATTCAG
CTTAAGGGTA AGAATGACAG AAGAGTTACG CTACTGCTCG ATCTACATAA CGACAAAGAA
CGTGTCATCA GTACGATATT GCTGTGTAAC AATGTTGTAA ACATATTAGC TTCTTCTATA
TCAGCTTTTT TTGTGGTCAA CTTTTTTGGA AGCATTGGGA TACTGGTTTC CACTTGTGTT
ATGAGCGTCA TAATAGTGAT TTTTGGTGAG ATATTTCCAA AGACTTACGC AATTAACCAC
CCTGAAACGC TCGGCATGTA TCTTGCACCG TTCATGGTCA TTTTAGTTAG ACTCTTTGGG
TCGCTTGTTA AGTATGTGAA CCTAGTGGTA GGTGTTTTAG TGAAGTGGTT TGCTCCGTCG
AGCGACTCAA CTAAGGTTTT TTCACCGTAT GATGCTATTC GAGGTCTGAT AATGTTGCAC
AAAAAATCGT ATGTGCAGCA GAATACACAA AAGAACTTAG AGGTCATTAA TAACATGCTG
GATCTTACTG AACTGCATGT GGATAAAATT ATGACGCACC GTAAAGATGT CTACTCTTTA
AACATAAACC TTCCAAAAGA TGAGCTCATC CAGTTGGTGC TCGGAACAAC ATACAGGTGG
ATACCTTTGT GGGAGGAAAG GGATGACAAT TTTGTTAAGG TTCTTAATGC CGTCCAACTC
AGAATTGCTT GTGCAAATGA TCAGGACATT AAGATGAAAG ACTACCTGAC TGAACCTTCC
TTCATTCCGG AAACAACCCT TGTGAGCGTC CAATTGCACA ATTTCAAGGT GAACAAGGCA
GATTTCTCGA TTGTCATTGA TGAATATGGC AATGCAATAG GAATAGTGAC CTTCTTTGAT
ATCATTGAGG AGATCATTGG CGAGGCAGTT TATACCCACA ATTACAAAGA TATAAAAGAC
AGTGGAGACA ACGGATACAT AATAAACGGA AGGATTCCAA TAAGGGATCT TAACAAAAAG
ATGGGTTTCA ATTTTCCAAC AGACCACAAT CGCACCTTTG CTGGCATGAT AATTGATGAA
ATAGAACGCA TTCCAAATGA GGGTGAGGTG TTTGAAATGT TTGGTTGCAC GCTTGAAATT
CTCAAAATGA GGAATAATAA GCTCGTCTCC GTAAAAGTTA AGAGGATAAA AGAGGGTACA
GGTGATGAAG GTTTGCACAC AAGTGCGGGG TGA
 
Protein sequence
MSGLLLSLLA LLLFLALLLS CVFSGGETAI TVVNPAKLIQ LKGKNDRRVT LLLDLHNDKE 
RVISTILLCN NVVNILASSI SAFFVVNFFG SIGILVSTCV MSVIIVIFGE IFPKTYAINH
PETLGMYLAP FMVILVRLFG SLVKYVNLVV GVLVKWFAPS SDSTKVFSPY DAIRGLIMLH
KKSYVQQNTQ KNLEVINNML DLTELHVDKI MTHRKDVYSL NINLPKDELI QLVLGTTYRW
IPLWEERDDN FVKVLNAVQL RIACANDQDI KMKDYLTEPS FIPETTLVSV QLHNFKVNKA
DFSIVIDEYG NAIGIVTFFD IIEEIIGEAV YTHNYKDIKD SGDNGYIING RIPIRDLNKK
MGFNFPTDHN RTFAGMIIDE IERIPNEGEV FEMFGCTLEI LKMRNNKLVS VKVKRIKEGT
GDEGLHTSAG