Gene NSE_0401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0401 
SymbolribE-1 
ID3931560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand- 
Start bp325597 
End bp326046 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content41% 
IMG OID637900557 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_506288 
Protein GI88608667 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAA AGGTCCTAGT AATTTGCAGT AAGGTCAACC CTAATATCTG CAAGGTGTTA 
TATAAAACTG CAGCAAAACA TCTTAAACAA CAGGGGGTAG CTTGCAAGTC AGTTTATGTA 
CCGGGCGCAT TTGAGTTGCC TACCGCACTT AACATTTTAC ATTCTAAAGA TTTTGCTGGT 
TACGTCATCT TAGGATGCAT CGTTAAATCT GGTACCCCAC ATTTCGATTA TGTTTCGTCC 
GCGGCCTGTC GTGGGATTAT GGATGTCGCC ATCAAGAATA ACCTTGCCAT AGGCTTCGGC 
GTTATAACAG CAAATAACAT GGAGCAAGCA AATGAGAGAT CTGTTTCTTA TGGAATTGCA 
GCTGTAAATG CCTGCATGGC AATGATCAAG CTAAAAGAAA GAAGTCCAAC ACTGTCAGAA 
GAAGATTTCT TTGAAGATAC AGATCTGTAA
 
Protein sequence
MQKKVLVICS KVNPNICKVL YKTAAKHLKQ QGVACKSVYV PGAFELPTAL NILHSKDFAG 
YVILGCIVKS GTPHFDYVSS AACRGIMDVA IKNNLAIGFG VITANNMEQA NERSVSYGIA 
AVNACMAMIK LKERSPTLSE EDFFEDTDL