Gene NSE_0395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0395 
Symbol 
ID3931841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp322213 
End bp323052 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content39% 
IMG OID637900551 
ProductYihY family protein 
Protein accessionYP_506282 
Protein GI88608339 
COG category[S] Function unknown 
COG ID[COG1295] Predicted membrane protein 
TIGRFAM ID[TIGR00765] YihY family protein (not ribonuclease BN) 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAA CTTTTGCAGT ACTAAAAATC TCGTTGTACA ACATGTTGTA TCATGGTGGC 
TCAGAGTATG CGGGATACCT GTCTTTTTTG CTGCTTCTAT CGATTTTTCC ATTTCTATTT
TTCTTCACTG CTGTAGCGGG CTACACAGCA AACATAGTAG GAGCTTCTTC ATATGAGATA
ACAAGAAAAT TGCTGTCGGT TTTCATAGAG AACGTACCAG AGAACATCAT CGAAGGCATA
ATGCCATATA TCAAGGAGAT TCTTGAGGGT CCTACACATG GTCTTCTGAC GCTTACCATT
CTTGGTGCAA TATGGACGGC CTCCTCCATT GTGGAAGGAT TAAAGGCAGC AGTAAACAAA
GCATACAATT TTGGAACTGA AACTCTGGTT TCAGAGTACA TACTAAGGCG TTTTGTAAGC
GTCATACAAT TCCTTTTGAT TTCCATTATC ATACTTATTT TTCTTCTCTT CCCAACGGTA
TATCCGCTCT TAACAAAGAA TGTATCTTTT CTTCATTTAC TAAAAAGACC AAGTTGGTTA
CCTTACAGCA CCGTGACAAC CTGCTGTATC TTCTGTTTTG TATCGGCCCT GTATATTTTC
TTCCCAAAGG AAAAGCAAAA GTTCACTGAT GTTGTTCCTG GAAGTATAAT GGTGGTCTCT
CTGTGGATTC TTACCTCGAT TGCGTTTTCG TTCTACTTAC ATTCTTTCGC CCAGATGAAC
ATAATTTACG GGAGCATTGC AGGGATAATC GTGGTTATGT TGTATTTTTA CTTGCTCAAC
CTGTGTTTCA TATACGGGGC AGAGATCAAT GCTTTAAATA AACGAATTAG CCAGAAATAG
 
Protein sequence
MKRTFAVLKI SLYNMLYHGG SEYAGYLSFL LLLSIFPFLF FFTAVAGYTA NIVGASSYEI 
TRKLLSVFIE NVPENIIEGI MPYIKEILEG PTHGLLTLTI LGAIWTASSI VEGLKAAVNK
AYNFGTETLV SEYILRRFVS VIQFLLISII ILIFLLFPTV YPLLTKNVSF LHLLKRPSWL
PYSTVTTCCI FCFVSALYIF FPKEKQKFTD VVPGSIMVVS LWILTSIAFS FYLHSFAQMN
IIYGSIAGII VVMLYFYLLN LCFIYGAEIN ALNKRISQK