| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0373 |
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| Symbol | |
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| ID | 3932261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 306962 |
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| End bp | 307957 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637900529 |
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| Product | putative tRNA-dihydrouridine synthase |
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| Protein accession | YP_506262 |
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| Protein GI | 88608299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family
[TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA ACCTGGCCAA TAACATAAGC ATTGACAACG TAATTTTAGC ACCCATGTCT
GGGGTAACTG ATATGCCTTA CAGGGATCTT GTAAAAAGTT TTGGCGCGGG ACTTGTGGTT
TCCGAGATGA TAGCAAGCAG AGCTATGATT CTGAAAACAA AAGATACAAT GAAAAAAGTT
TCTTTGTCTC CTAGAGAAGA TATCACTGCT ATCCAATTAG CCGGGTTCGA GCCAGACGTA
ATGGCAGAAG CAGCAAAAAT AAATGAAGAT ATGGGCGCTA AAATCATTGA TATTAATTTC
GGGTGCCCTG TTAAGAAAGT AGTCAACGGA TATGCTGGTT CCTACCTGAT GAAAGACGAA
TGTCACGCAG CAAAAATCCT CGAAGCAACA GTAAAGGCAG TTAAAATACC AGTAACGCTA
AAAATGCGCA CTGGTTGGGA TGAAAATCAC AGGAACGCTC CGAAATTAGC AAAAATTGCG
GAGGATCTTG GAATAAAGAT GATCACTATA CACGGACGAA CACGAGCACA AATGTATAAA
GGAAAGTCAG ATTGGCAATT TATCCGGACA GTAAAAAATA CCGTTAAGAT CCCAGTAATA
GCAAACGGTG ATATTAAAAC GTACGAAGAT GCTGAAAGAG CCTTAGTAGA GTCTGGTGCT
GACGGTATCA TGATCGGTCG TGGAGCCTAT GGAAAACCTT GGTCTATAAG AAATATGTTG
CACTTTCTCA GGACGGGCAA AAAATTACAA GAACCTACAC CACAGGAAAA ACTTCCGATA
ATACTGCAAC ATATTAGTTC AATATTCTCT CACTATGGCA CCGAAATGGG TATAGGAATC
GCAAGAAAGC ACATTCTCTG GTACAGCGCG AATTATAAAA ACTCCGCTGA ATTCCGACAA
CAAATATGCC AAGAAACATG CGTAGAAAAA CTTCTCGAAA GAGTGGAAGA GTTCTTTCAT
TCAGCTTGTT GTACTACCAA ACTACCACAA CAATAA
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| Protein sequence | MKLNLANNIS IDNVILAPMS GVTDMPYRDL VKSFGAGLVV SEMIASRAMI LKTKDTMKKV
SLSPREDITA IQLAGFEPDV MAEAAKINED MGAKIIDINF GCPVKKVVNG YAGSYLMKDE
CHAAKILEAT VKAVKIPVTL KMRTGWDENH RNAPKLAKIA EDLGIKMITI HGRTRAQMYK
GKSDWQFIRT VKNTVKIPVI ANGDIKTYED AERALVESGA DGIMIGRGAY GKPWSIRNML
HFLRTGKKLQ EPTPQEKLPI ILQHISSIFS HYGTEMGIGI ARKHILWYSA NYKNSAEFRQ
QICQETCVEK LLERVEEFFH SACCTTKLPQ Q
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