| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0369 |
|---|
| Symbol | ppdK |
|---|
| ID | 3932219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | + |
|---|
| Start bp | 302295 |
|---|
| End bp | 304898 |
|---|
| Gene Length | 2604 bp |
|---|
| Protein Length | 867 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637900525 |
|---|
| Product | pyruvate phosphate dikinase |
|---|
| Protein accession | YP_506258 |
|---|
| Protein GI | 88608476 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
|---|
| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGA AGCTTGTATA TCATTTTTCC CCTTCTAATG CGGATGGGGA TGCCTTGATG
TTGGATGTGC TCGGTGGCAA GGGTGCGAAT CTTGCGCAGA TGTGCAACAT GGGGTTACCA
GTGCCGCCAG GATTTACAAT TTCCTCGAGT GCTTGTGAGC TTTATCATCG TGATAAAGAT
CTTTTCCGCA AGATTTTAGA AAAGGAAATA CAAAAATCCT TGCAAGTGCT TGAGGCTGTC
ACCGGTAAGG TATTTGGATC AAAAGTGAGA CCACTATTGG TTTCGGTGCG TTCAGGTAGC
AAGTTTTCTA TGCCGGGGAT GCTTGATACC ATTCTTAATG TAGGGCTAAA CGATGAGATC
ATCGCTTCTT GTAGTAGCAG GTTTATTCTT GACAGCTATA GAAGACTCAT TCAGATGTAT
GGGGATGTGG TTCTAAAAGT AGAATCCTAC CATTTTGAAG AGGTGCTGTA CAATTACAAG
AACTCCAAGG GTATCCTGCG TGATCATGAT CTCAGCATTA GCGACTTGCA TGAGCTAATC
GAGGCTTTTC GCGAAGTTGT CAAGCGGAAT TCTCACGCTT CTTTACCAGA GGATGTTTAT
GTACAGGTCA TGGCTTGCAT AGAGGCTGTT TTTCAGTCCT GGGGAAACGA GCGTGCAAAA
ACGTACAGAA AAATTCATGA TATTCCAGAG AGTGTAGGTA CTGCAGTTAA TATACAGAGT
ATGGTCTTTG GGAATTTCAA TGAGCGTTCT GGTTCTGGTG TTTTATTCAC AAGGAATCCT
TCCAATGGCC ACAAAACGAT GTTCGGTGAG TACATGAAAT GTGTGCAAGG AGAAGATATT
GTTTCTGGTG TGAGAACGCC TCAACCTATT GGCGAACTGA AGTCTGAGAA TCCAAGATTG
TATGAACAGA TTGAATCGGT TTGTCAAAGT TTGGAAAAGC ACTATAGGGA CGTGCAAGAT
ATTGAATTTA CTATCGAGGA TGACGCGTTG TATATACTCC AGACGAGGAG TGCAAAGCGT
TCAGTAGAAG CGGCGATAAG GGTTGCTGTC GATATGGTAA AGGAGGGATT GATAACAAAA
GAAGAAGCTG TTCTCAGAAT CAGACCAAAG TCGCTGGAAA GCTTGCTTCA TCCTAGAATT
GACGATGAAG CAAACCATCA AATAATAGGT AGTGGTTTGC CCGCATCACC AGGCGCTGCT
TCTGGAAAAA TAATTTTCTC CACTGAGGAG GCAGTAAAGC GAGCTCAAGG TGGTGAGAAG
GTGATTCTTG TCAAAAGCGA GACTAGTCCA GAGGATATAG CGGGTATGCA TGCTGCAGTT
GCAATTCTTA CGACGAGAGG TGGTATGACT TCGCATGCAG CTGTTGTGGC AAGAGGTATG
GGCAAACCTT GTGTTTGCGC TCTTTCTGGT GGAAGCATTG ACCAATATTC TCAGGTCCTG
CGTATTACAC CTGATGTCAC TTTGAACAAA GGAGATGAAA TTACAATTGA TGGGACGAGT
GGTAATGTCA TTTTAGGAAA CGCAAGTACT TCTGAGTTCA GTTTTTCCGA TGAATTTAGC
ACTTTCATGA CTTGGGTCGA TGAATTTAGG CAAATATCTG TGAGGGCAAA TGCTGAAACG
AAAGAAGATG TAGAAGTGGC GTTAAGATTT GGGGCGGATG GAATAGGTCT CTGCAGAACT
GAACATATGT TTTTCTCAGA AGATAGAATT CATATAGTCC GGGATATGAT AGTTGCAGAA
GATCTACGGC AGAGAAGTAT AGCCCTAAAA AAGTTGCTTC CTATCCAGCA AGGCTGTTTT
GCAGCGATCT TTCGTGAAAT GCAGGGTAGG TGTGTCACAG TGAGATTACT TGATCCACCA
TTACATGAAT TTTTACCAGC TGATGAGGCA AGCTTAGAGA GTTTTAGGAA GCATTCTGCA
CTTGAAGACT CTTTCATACA AAGGAGGATA AAGGTGCTTA AAGAAGAGAA TCCGATGCTG
GGGCATCGTG GTTGTAGAAT AGCGATATCG CATCCTGAAA TATATGAGAT GCAGCTTCAT
GCGATTTTTG GAGCGGCACA AGAAGTGGGT GACGTAAAAC TAGAGGTTAT GATTCCGTTT
ATCATGAACG CAGATGAGCT GTGTGCAATA AAACAGCTTG TCACATCGGT TGCGCAAGGG
TACTCGGTTG ATTATTTATT AGGTAACATG ATCGAATTAC CTTCTGCTGC AATTCTTGCT
GACAGAATAG CTGAAAGTTC AGACTTTTTT AGTTTTGGGA CTAATGATCT CACCCAAACG
ACTCTGGGTA TTTCAAGAGA TGATTGTGGA ATGTTCATGA ATATTTATAA GGAGAAGGGT
TTGTTCAGGG AGGATCCATT TATCTCTATT CAAGTTGAAA GTGTTGGTTT TTTGATCAAG
GAAGCTATCA AAAAAGGTAG AAGTGCAAAC AAAGCACTGA AAATAGGTAT CTGTGGTGAA
CATGGTGGTG ACCCATACTC TGTAGAGTTT TTTGCATCTT CGGGTGTGGA CTATGTTTCT
TGTTCGCCGT ACAGGGTGCC GATTGCGAAA GTCGCAGCTG CACAGCATTC CATTAAGATG
AAGCAAAACA ACGAGACTCT TTAG
|
|---|
| Protein sequence | MSEKLVYHFS PSNADGDALM LDVLGGKGAN LAQMCNMGLP VPPGFTISSS ACELYHRDKD
LFRKILEKEI QKSLQVLEAV TGKVFGSKVR PLLVSVRSGS KFSMPGMLDT ILNVGLNDEI
IASCSSRFIL DSYRRLIQMY GDVVLKVESY HFEEVLYNYK NSKGILRDHD LSISDLHELI
EAFREVVKRN SHASLPEDVY VQVMACIEAV FQSWGNERAK TYRKIHDIPE SVGTAVNIQS
MVFGNFNERS GSGVLFTRNP SNGHKTMFGE YMKCVQGEDI VSGVRTPQPI GELKSENPRL
YEQIESVCQS LEKHYRDVQD IEFTIEDDAL YILQTRSAKR SVEAAIRVAV DMVKEGLITK
EEAVLRIRPK SLESLLHPRI DDEANHQIIG SGLPASPGAA SGKIIFSTEE AVKRAQGGEK
VILVKSETSP EDIAGMHAAV AILTTRGGMT SHAAVVARGM GKPCVCALSG GSIDQYSQVL
RITPDVTLNK GDEITIDGTS GNVILGNAST SEFSFSDEFS TFMTWVDEFR QISVRANAET
KEDVEVALRF GADGIGLCRT EHMFFSEDRI HIVRDMIVAE DLRQRSIALK KLLPIQQGCF
AAIFREMQGR CVTVRLLDPP LHEFLPADEA SLESFRKHSA LEDSFIQRRI KVLKEENPML
GHRGCRIAIS HPEIYEMQLH AIFGAAQEVG DVKLEVMIPF IMNADELCAI KQLVTSVAQG
YSVDYLLGNM IELPSAAILA DRIAESSDFF SFGTNDLTQT TLGISRDDCG MFMNIYKEKG
LFREDPFISI QVESVGFLIK EAIKKGRSAN KALKIGICGE HGGDPYSVEF FASSGVDYVS
CSPYRVPIAK VAAAQHSIKM KQNNETL
|
|---|
| |