Gene NSE_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0359 
Symbol 
ID3931547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp294217 
End bp294711 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content44% 
IMG OID637900515 
Productputative protein-export protein SecB 
Protein accessionYP_506248 
Protein GI88608713 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGACA AAGACGAAAT CACCCATGAT GCACAATCCG AAAACGAAGA AAGCCTCCCA 
TTGGCACGGC CTGAAGGTCA ATTCATGAAG TCAATAGCTC TTGACACGCC TAACTCTCCG
GAGGTGTTTA GCATCATGAA AAATCCTCCG GAGGTGGATG TGCAGTGCAA TATAGACAGC
AGAGCAATAG ATGAGAGAAA CGGTGTATAC GAAGTGGTTC TTGATTTAAA AACTGAAGCA
CGGATAAAGG ATAAAGACTC TCCAGATGAA ACACGTGTTG CGTTCGTTTG TAAGTTGAAG
TACTGCGGTG TCTTCACGAT AAAGAATCTC ACTCAGGAAC AACTGAGGCA GACATTACTT
GTCGAAGCGC CTACGTTACT CTTTCCGTTT GCAAGGAGAA TTATAGCTAC GGCAACAACT
GATGCAGGTT TCCCACCTTT GATGCTTGCA CCTATAAATT TTGCTCAAAA ATACGCTGAG
AGTCAAAGAG ATTAG
 
Protein sequence
MPDKDEITHD AQSENEESLP LARPEGQFMK SIALDTPNSP EVFSIMKNPP EVDVQCNIDS 
RAIDERNGVY EVVLDLKTEA RIKDKDSPDE TRVAFVCKLK YCGVFTIKNL TQEQLRQTLL
VEAPTLLFPF ARRIIATATT DAGFPPLMLA PINFAQKYAE SQRD