Gene NSE_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0347 
Symbollon 
ID3931624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp284981 
End bp287461 
Gene Length2481 bp 
Protein Length826 aa 
Translation table11 
GC content42% 
IMG OID637900503 
ProductATP-dependent protease La 
Protein accessionYP_506236 
Protein GI88608076 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.308867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG AAGAGCTGAA TAATCGTGAC ACAGAGTCAA AGCAAGAACA TGATGAAAAC 
AATTCTAACT TTGAAGCAGG GTCAGCACAC ATGAATTTAC CGGTTCTACC TCTTAGGGAG
GTTATCTTTT TTCCCGGTGA TTACCTTCCA ATATTTATAG GAAGGAAAGG ATCTATACAG
GCAATGGATA AGGCACTGGC GGAAACATCT GAAAATACTG GAAGGATGCT CTTGATTGCA
CAGAAGAACC CAAAAAAGGA AATTCCAGAA GGTAAGGATT TGTACGAGGT GGGTGTCATA
GCAAAAATTG CTGAACCAAA GATCAATCTC CAAGATGGCG GTGTCAAGCT CATGGTAATT
GTTGAGTGTC GTGCACGCGC TGTGAATTTC AGAAAAAGCG AGGGAGTACT TGAAGCCGAC
GTCCTTCCAA TAGAGGAGGA GGAAAGCGAC AACGTGGACA TAGAGGCATA TCGAAGGGCA
GTCGTTCAGA ATTTCGAAAA GTGCGTTAAG TTGAGCGAGA CAATTCCAGA TGAAATCATT
GGACTCCTCT CTCAAATAGA TTCCACTAGC AGAATAGCGG ACTTGGTAAC TGCAAGTATA
AACCTGAAGC TTAGTGTAAA ACAAGAAATA CTCGAAACTG TAGACCTCTT AGAAAGGATA
AAAAAAGTCC ATGCCCTCCT GGAGAAAGAG CTTGGAGTAT TGCAGGTAAA ACAGCAGATT
AAGGAAAAGA CAGAGAGTCA AATTAAGAAA TCGCATAAGG TATACCTACT TAATGAACAA
CTGAAAGCAA TTACCAAGGA ACTATACGAC AAAGAAGGTG AAGAATATGA TGAACTTGTC
GATCTAGAGA AAAAAATAGG AAATGGTAAG CTCTCTGCAG AAGCAAAAGA AAAAGTTTCG
AAAGAACTAA AAAAGCTCAA GAACATGGTG CCCATGTCTG CTGAAGCAAC TGTGGTTCGT
AATTACGTAG ACTGGATCAT TTCCCTTCCT TGGAAAAAGA AGGGTAAGAT GATTACGGAT
ATTGCAGCAT CAGAACGAAT TCTAAAAGCG AGCCATTACG GCATAGAAAA GGTCAAAGAG
CGCATTATTG AATACTTGGC TGTGCAAAAC CGTACGAAAT CGTTTAAGGG CTCCATACTG
TGTTTACTTG GTCCTCCAGG CGTTGGAAAG ACCTCGCTTG CTAGCGCGAT AGCGGAAGCT
ACTGGCAGAC CGTTTGTTAG GATGTCACTC GGCGGAATAA AGGATGAATC TGAAATTAAA
GGTCATAGAA GGACTTACAT AGGTGCAATG CCAGGAAAGA TAATCCAGCA TATGAAAAAG
GCAAAATTAT CTAATCCTGT CTTCCTTCTT GATGAAATAG ATAAAATGTC TTCGGATTTC
AGAAGCGATC CTGCTTTTGC ACTTCTAGAA GTGCTAGATC CAGAACAGAA CGCACACTTT
GTAGATCACT ACTTGGAAGT TGAATACGAT TTGAGTGATG TCATGTTCGT TGCAACTGCA
AACAGCTTAA ATATGATTCC CGCATTGTTA GATCGCTTGG AAATAATACG TCTGGAGGCC
TATTCAGAAG AAGAAAAATT ACAGATCGCG GAGCACTATC TCATCGGGAA ACTGCAAAGG
GAACACGGTT TGAAAAAAAG CGAGTGGAGC ATTTCCAAGG AAGCACTGAA ATTACTCATA
CGTCGTTATA CTCGTGAAAG CGGAGTACGA AATTTGAAGA GAGAGCTTGC AAACCTGATG
AGGAAAGCTG TCAAGAAGTT AGGTGTGCAA TCTGGTCTTA AATCTATAGA GGTTTCAGTT
AAAAATCTGA AGAAGTATGC CGGCGTAGAA AAATATACTT TCGGTACTGC AGAACCGGAA
AATTTAGTAG GTATGACTAC GGGTCTTGCT TACACACAAA CCGGAGGGGA TTTAATCATG
ATAGAGGCAG TCTTACTCCC AGGAAAAGGC GAGATTCGTT CTACGGGAAA GCTTGGAGAA
GTAATGCAAG AATCTGTCCA AGCGGCTTAT AGCTTCGTCT GCTCAAATTG TAACAAGTTT
GGTTTCACAT CGAAGTTCTT TAAAAGCAAG GATGTGCACC TTCATGTACC CGAGGGTGCA
ACTTCAAAGG ATGGTCCGTC TGCAGGGGTT GCGATATGCA CTTCTATCGT CTCGGTGATG
ACTGGAATTC CAGTACGCTC AAACGTTGCA ATGACTGGAG AAGTGAGTCT CAGAGGAAAA
GTAATGGAAA TTGGTGGTCT GAAGGAAAAA CTTCTAGCGG CTGTGCGTGG TGGTATAAAA
ATTGTCCTGA TACCAGCAAG CAATGAAAAG GATTTGGAAA ACATTCCAAA ATCGGTGAAA
AACGCTGTGA GGATCATTCC TGTCTCCACC GTATCAGAGG CACTAACGTT CACTCTTGCC
GAGCAACCAA CGCCACTTGC GGTTGACGTC TGGCCAGATA TCCCGTTGTC TTCGACACAA
CAGTCAGAAC AAAGGGTATA A
 
Protein sequence
MSEEELNNRD TESKQEHDEN NSNFEAGSAH MNLPVLPLRE VIFFPGDYLP IFIGRKGSIQ 
AMDKALAETS ENTGRMLLIA QKNPKKEIPE GKDLYEVGVI AKIAEPKINL QDGGVKLMVI
VECRARAVNF RKSEGVLEAD VLPIEEEESD NVDIEAYRRA VVQNFEKCVK LSETIPDEII
GLLSQIDSTS RIADLVTASI NLKLSVKQEI LETVDLLERI KKVHALLEKE LGVLQVKQQI
KEKTESQIKK SHKVYLLNEQ LKAITKELYD KEGEEYDELV DLEKKIGNGK LSAEAKEKVS
KELKKLKNMV PMSAEATVVR NYVDWIISLP WKKKGKMITD IAASERILKA SHYGIEKVKE
RIIEYLAVQN RTKSFKGSIL CLLGPPGVGK TSLASAIAEA TGRPFVRMSL GGIKDESEIK
GHRRTYIGAM PGKIIQHMKK AKLSNPVFLL DEIDKMSSDF RSDPAFALLE VLDPEQNAHF
VDHYLEVEYD LSDVMFVATA NSLNMIPALL DRLEIIRLEA YSEEEKLQIA EHYLIGKLQR
EHGLKKSEWS ISKEALKLLI RRYTRESGVR NLKRELANLM RKAVKKLGVQ SGLKSIEVSV
KNLKKYAGVE KYTFGTAEPE NLVGMTTGLA YTQTGGDLIM IEAVLLPGKG EIRSTGKLGE
VMQESVQAAY SFVCSNCNKF GFTSKFFKSK DVHLHVPEGA TSKDGPSAGV AICTSIVSVM
TGIPVRSNVA MTGEVSLRGK VMEIGGLKEK LLAAVRGGIK IVLIPASNEK DLENIPKSVK
NAVRIIPVST VSEALTFTLA EQPTPLAVDV WPDIPLSSTQ QSEQRV