| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0343 |
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| Symbol | |
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| ID | 3931471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 282179 |
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| End bp | 282739 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 637900499 |
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| Product | ribosomal subunit interface protein |
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| Protein accession | YP_506232 |
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| Protein GI | 88608249 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein
[TIGR01633] putative phage tail component, N-terminal domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00438773 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTAA CAGTTTCTGG GCATGGTTTT GATTTAGGTT CTAGCTTATC TGAGTATATC
ACTGATCGGA TTCTTTTTAG TGTGAAGAAA CATCTCGTAC AAGCTGTGGG TGCTCGTGTT
TCACTTTCTA AGGAAGGACG CTTCTTTCAC GTAGATGTGA TCGTAAATAG CCCTATATCG
CTAATTAAAG CAAGTGGCGA GTCTCATGAT CCGTATCTAG CTTTTGATAG TGCTTTTTCA
AAAATATTAT TAAAGTTGCG TCGATATAAA GATAGGTTAA AGGAGCATAA ATCAGAGGCC
AAGTGCAGCA TGAAATTTGC TCTACATCAT CATGAGTATG AAACACAAGG GCCAAGGGCT
ATTCTGGTTA AAGAGGAGAA AATTCATCTT AGGCAGCTTT CTCTAGAGGA AGCCATAATG
CATATGGACC TTATGGCACT GCCCGCTTTT GTTTTTATTA ATCTTGAAAC GAATAAGTTG
AATATAATTC ATAAAGAAGA TAACTCAAAA GAGACTATTG TTCTTCTAGA TACAAACCAA
GAGTTTAAAG AGATAGATTA A
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| Protein sequence | MKVTVSGHGF DLGSSLSEYI TDRILFSVKK HLVQAVGARV SLSKEGRFFH VDVIVNSPIS
LIKASGESHD PYLAFDSAFS KILLKLRRYK DRLKEHKSEA KCSMKFALHH HEYETQGPRA
ILVKEEKIHL RQLSLEEAIM HMDLMALPAF VFINLETNKL NIIHKEDNSK ETIVLLDTNQ
EFKEID
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