Gene NSE_0294 details

Gene Information

• Locus tag: NSE_0294
• Symbol: thrS
• ID: 3931448
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: -
• Start bp: 238350
• End bp: 240263
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 637900450
• Product: threonyl-tRNA synthetase
• Protein accession: YP_506185
• Protein GI: 88608148
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGGACGTG TCGTGTTAAC CGTAACTCTT TTGTCATCTT CTTTCAGCCT ATCCTCTGGT 
AAGACCGTTG GATCTGTAAT ATCTGATTTT GATGCTGAGA TTTTTTCTAA GACAATTGCA 
GCTTCGGTAA ATGGGGTTAG TGTTGATCTC TCTTACCGTC TCGACTGTGA TGCAAATATA 
GAACCCATTC TCCTCGAAAG CGAAGCGGGA ATTGAGATAC TAAGACATGA TTGTGCTCAT 
GTCATGGCAC AAGCAGTACA GGAACTATAC CCAGAAACGA AATTAGGAAT AGGACCAGTC 
ATTGATGATG GTTTTTATTA TGACTTTTCT ACTCCCATCG CTTTCTCCGA CAGTGATTTC 
GAAAAAATAG AAGAGAAGAT TAGAGAAATC ATTCAGAGGA ACTACCGGAT AATACGTGAA 
GAATGGAGCA GAGACGATGC AGTTTCGTTT TTCCAAAAAA AGGGCGAAAA GTATAAGGTT 
GAACTTATCA GTAGGATTCC GCCTGAAGAA AAGATTTCTA TATACAAGCA GGGTGATTTT 
ATTGACTTGT GCCGTGGTCC GCATGCCCCT TCGACAGGTT GGTTGAAACA TTTTAAATTA 
CTGAAGGTAT CGACTGCTTA CTGGCTTGGT GACGCAAAAA GCGACTCTTT GCAGCGTATA 
TATGGCACCG CATGGGCAAC AAAAGACGGA TTGGAAGCTT ATCTTTCCTT CCTACATGAA 
GCAAAAAAGA GGGATCATCG TGCTATTGGC AAGACAATGG AACTTTTTCA TCTACAAGAA 
GAAGCTCAAG GACAGGTCTT TTGGCACGAG AATGGCTTCA TCCTTTACAG AGTATTGGAG 
AATTACATCC GTAACAAGCT CAAGACACAC GGTTATCGCG AGGTAAAAAC TCCACTCGTA 
TACAACAAAT GCCTGTGGGA AAGATCAGGA CATTGGTCTA AGTTCAAAGA GAATATGTTC 
GTTATAAGAT CGGATGATGG TGAATTTTCA CTAAAACCGA TGAACTGTCC TGCACATATT 
GAGGTCTACA AGCAGTCTCT AAAAAGTTAT AGAGATTTGC CACTGCGGCT AGCAGAATTT 
GGTATGTGTC ACAGAAATGA AGCTTCTGGA GCACTGCATG GTCTAATGAG GGTCAGAGGT 
TTTGTTCAGG ATGATGCACA TATTTTCTGT ACACCTCAGC AAATCTGTGA CGAGACTATT 
GCGTTTTGCG GATTACTAAA AGAGGTCTAC AGGGATCTTG GATTCACAGA AGTAGAGGTG 
CGCTTTTCAG ATCGCCCAGA AGTACGTCTT GGAAATGACG AAACCTGGGA TAAGGCAGAG 
ATTGCTCTGA AATCTGCGAT GGATAAAGCA GGGTTGATTT ATACACTCAA CCCCGGAGAA 
GGAGCGTTCT ATGGACCAAA AATAGAGTTT GTACTGGTAG ATGCACTAAA AAGAAAATGG 
CAATGTGGAA CTTTGCAGGT AGATTTTGTG TTGCCTGAAC GTCTGGATGC AACCTATATA 
GACCATGAAG GGAAAAAGCA GCACCCTGTA ATGCTGCACA GAGCTATTTT AGGTACGTTT 
GAACGTTTCT TGGGTATCCT GATTGAACAT TATGATGGCA AATTTCCATT GTGGCTCGCT 
CCCACACAGG TAGCAGTCCT CACCATTACG GAAAAGGTTG AAGAATATGC AAAGTCGCTA 
CTGAACCATC TATCCAAAAC AGGTATACGT GCTGTCTCTG ACTTTAGCAA TCAAAGAATT 
GATTACAAAA TCAGATATCA TACTACAAGA AGGGTCCCAA TTTTGTGGAT CATCGGTAGG 
ATTGAGGAAA AAAGCAATAG CGTCACGGTA CGAAGAATGG GTTCAAGTGA ATCTGAAGTG 
AAGACAGTTG ATACAGCCCT TGGGGATATA TTGAGGGAGT TCAATGTTAG ATAA 

 

Protein sequence

MGRVVLTVTL LSSSFSLSSG KTVGSVISDF DAEIFSKTIA ASVNGVSVDL SYRLDCDANI 
EPILLESEAG IEILRHDCAH VMAQAVQELY PETKLGIGPV IDDGFYYDFS TPIAFSDSDF 
EKIEEKIREI IQRNYRIIRE EWSRDDAVSF FQKKGEKYKV ELISRIPPEE KISIYKQGDF 
IDLCRGPHAP STGWLKHFKL LKVSTAYWLG DAKSDSLQRI YGTAWATKDG LEAYLSFLHE 
AKKRDHRAIG KTMELFHLQE EAQGQVFWHE NGFILYRVLE NYIRNKLKTH GYREVKTPLV 
YNKCLWERSG HWSKFKENMF VIRSDDGEFS LKPMNCPAHI EVYKQSLKSY RDLPLRLAEF 
GMCHRNEASG ALHGLMRVRG FVQDDAHIFC TPQQICDETI AFCGLLKEVY RDLGFTEVEV 
RFSDRPEVRL GNDETWDKAE IALKSAMDKA GLIYTLNPGE GAFYGPKIEF VLVDALKRKW 
QCGTLQVDFV LPERLDATYI DHEGKKQHPV MLHRAILGTF ERFLGILIEH YDGKFPLWLA 
PTQVAVLTIT EKVEEYAKSL LNHLSKTGIR AVSDFSNQRI DYKIRYHTTR RVPILWIIGR 
IEEKSNSVTV RRMGSSESEV KTVDTALGDI LREFNVR