Gene NSE_0246 details

Gene Information

• Locus tag: NSE_0246
• Symbol: nth
• ID: 3931594
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: -
• Start bp: 209356
• End bp: 210006
• Gene Length: 651 bp
• Protein Length: 216 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637900402
• Product: endonuclease III
• Protein accession: YP_506140
• Protein GI: 88608856
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0177] Predicted EndoIII-related endonuclease
• TIGRFAM ID: [TIGR01083] endonuclease III

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.00760265
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAAAA AAACACGTCC TTCACGTTCT TGGGTAGTTG AAATCCTGGA AAGGTTTCAG 
AGACAAATGC CGGAGCCTAA AATCGAGTTA GAATATGTAA ATAAATTCAC GCTTATCATA 
GCAGTGCTAC TATCCGCACA GTCCACAGAT GTTAGTGTGA ACAAAGCGAC AAAGGCTCTA 
TTTCGTGTTG CATACGAGCC AGAGCATTAC GCAAAAATGG ACCTTGCAAA ACTGAAAGAG 
TCTATAAAAA CGATTGGTTT GCACAATAAC AAGGCAAAAA ATATCATCGC CTTAGCAAAG 
AAACTGATTT CGGATAAGCA GACTGACATA CCAAATAATT TTCAATATCT ACAGTCCCTT 
CCAGGAATAG GAAGAAAGTC AGCGAACGTA ATATTGTGTA CACTCTTTGG AGAAAAAAGA 
ATCGCTGTAG ATACACATGT CTTCAGAGTA AGCAATAGAA TAGGACTTGT GCATGCAAGA 
AATGTCTTAG AAGTAGAGAA ACAATTACTT GAAAACATTC CAAAAACCTT CCTACCACAA 
GCACATCTGT GGCTTGTCTT GCACGGGAGA TACATATGTA AAGCAAGGAA ACCAGAGTGC 
AAAAACTGTA TCATCAATGA TTTATGCAAC TTTAAGCTGG GTATAAAATA A 

 

Protein sequence

MMKKTRPSRS WVVEILERFQ RQMPEPKIEL EYVNKFTLII AVLLSAQSTD VSVNKATKAL 
FRVAYEPEHY AKMDLAKLKE SIKTIGLHNN KAKNIIALAK KLISDKQTDI PNNFQYLQSL 
PGIGRKSANV ILCTLFGEKR IAVDTHVFRV SNRIGLVHAR NVLEVEKQLL ENIPKTFLPQ 
AHLWLVLHGR YICKARKPEC KNCIINDLCN FKLGIK