| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0237 |
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| Symbol | |
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| ID | 3931500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | - |
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| Start bp | 201691 |
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| End bp | 202701 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637900393 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_506131 |
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| Protein GI | 88608161 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0860272 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATT TTCGCTCCAG TCTATTAATA TGCTTCTTTT TGTCGCTGCT CTTGAACCAT
GCAATCAGTG AAGAACGCTA TTTCATGAGA GTGGGTACCG GCTCTATCTC TGGAGTATAC
TACGCTACCG GCAACGCAAT ATGTAGATTC ATCAGAAAGC ACTCGCTGCA TGATAACACA
TTCAACGTAT CGTGCTCAGT CCAATCTACG CCTGGTACTA TGTACAATTT GAACGCACTC
AGAAACAGTG ACTTAGAACT TGCAGCAGCA CAAGAGGATT GGGCCTATGA CGCATATAAT
GGCACAGGGC TCTTTAGTTC AATGCAGCCT ATGTCCTCAC TTCGTTCACT TTTTTCCACA
CATAAAGAGG CCTTTACTGT TCTCGTACGA AAGGACTCAG GAATAAGAGA TTTTGATGGA
ATCAAACACA GGATAGTTAA CATTGGTGCA CCCGGCACTG GAGTCAGAGG AACCATGGAA
AAAATCATGA GAGTTAAGGG ATGGACAAGT ACTGATTTTA AACTTACCAC GGAGTTGAAC
TCATCTGAGC AGGTGCGTGC CCTTTGCGAT GGCAAAATTG ACGTAATGAC GACGGTTATA
GGTCATCCGA GTGGGCTTTT TCAGGAGGCT TCTGCGACCT GTAGTGTGCA ACTCATACCA
TTAGATGATG AAACAAGAAA GAAGTTACTT CTAGATCATC CGTATTATTA TTCTTATGAC
ATTCCCGTTG ACCTTTACTC GGGATTAGCT GAGGAAGTAA CAAAAACCAT TGCAGTGAAA
TCAGGATTTT ATGTCCTTGA GGATTTTTCT GATGATAAAG CATATAAATT AGTAAGCAGC
GTTTTCTCGA ATTTTTCCGC TTTACAAGGA ACACATCCGG CTTTTTCGCA CATAACAAAA
GTTGATCTCA TTCCAGAAGC TGGAAATATA CCAATTCATC CAGGCGCGAA ACAGTTTTAC
AAGCAAATTG GTCTCCTGCG AGAGTCTGTA GGGAAGGCTT ACCCTAAATG A
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| Protein sequence | MLNFRSSLLI CFFLSLLLNH AISEERYFMR VGTGSISGVY YATGNAICRF IRKHSLHDNT
FNVSCSVQST PGTMYNLNAL RNSDLELAAA QEDWAYDAYN GTGLFSSMQP MSSLRSLFST
HKEAFTVLVR KDSGIRDFDG IKHRIVNIGA PGTGVRGTME KIMRVKGWTS TDFKLTTELN
SSEQVRALCD GKIDVMTTVI GHPSGLFQEA SATCSVQLIP LDDETRKKLL LDHPYYYSYD
IPVDLYSGLA EEVTKTIAVK SGFYVLEDFS DDKAYKLVSS VFSNFSALQG THPAFSHITK
VDLIPEAGNI PIHPGAKQFY KQIGLLRESV GKAYPK
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