Gene NSE_0230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0230 
Symbol 
ID3931378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp195578 
End bp196012 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content41% 
IMG OID637900386 
ProductDNA-binding protein 
Protein accessionYP_506124 
Protein GI88608440 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0592162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAAAA TCTCTGAGAA TTTTAAGAAA CGTGCGGAAA CTGACGTGAT GATTGGAAAG 
CAGATTCGTA GGCTTAGGAC CCTTAAAGGT TATAGCCAAG CTGCCATAGC CAAGGAAATT
GGTGTGACCT TCCAGCAGCT TCAAAAGTAC GAATGCGGTG CAAACCGCCT TTGCGTAAGC
AGGCTGCTTG ACATATGTAA GTTTTGTAAA GTTTCGCCCT CCTATTTTTT TGCTTCGCTA
AATAAGGAGC AAGAAGGGGA CACATTGCAC GATTCAGAAA ACAGTATAGA GTTTGAACAT
GAGAATGAAT ATAACAAGGA GCTTCTGGTT TTAGTACGTG CATTCAAGTC CATTACGCAA
GATTCAGTAA GAAGTAAAGT TCTCTCATTG GTAAAGACTA TGTCTCAAGC TTATGGAGAG
GAAAAAGATG AGTGA
 
Protein sequence
MPKISENFKK RAETDVMIGK QIRRLRTLKG YSQAAIAKEI GVTFQQLQKY ECGANRLCVS 
RLLDICKFCK VSPSYFFASL NKEQEGDTLH DSENSIEFEH ENEYNKELLV LVRAFKSITQ
DSVRSKVLSL VKTMSQAYGE EKDE