Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0230 |
Symbol | |
ID | 3931378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 195578 |
End bp | 196012 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637900386 |
Product | DNA-binding protein |
Protein accession | YP_506124 |
Protein GI | 88608440 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0592162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAA TCTCTGAGAA TTTTAAGAAA CGTGCGGAAA CTGACGTGAT GATTGGAAAG CAGATTCGTA GGCTTAGGAC CCTTAAAGGT TATAGCCAAG CTGCCATAGC CAAGGAAATT GGTGTGACCT TCCAGCAGCT TCAAAAGTAC GAATGCGGTG CAAACCGCCT TTGCGTAAGC AGGCTGCTTG ACATATGTAA GTTTTGTAAA GTTTCGCCCT CCTATTTTTT TGCTTCGCTA AATAAGGAGC AAGAAGGGGA CACATTGCAC GATTCAGAAA ACAGTATAGA GTTTGAACAT GAGAATGAAT ATAACAAGGA GCTTCTGGTT TTAGTACGTG CATTCAAGTC CATTACGCAA GATTCAGTAA GAAGTAAAGT TCTCTCATTG GTAAAGACTA TGTCTCAAGC TTATGGAGAG GAAAAAGATG AGTGA
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Protein sequence | MPKISENFKK RAETDVMIGK QIRRLRTLKG YSQAAIAKEI GVTFQQLQKY ECGANRLCVS RLLDICKFCK VSPSYFFASL NKEQEGDTLH DSENSIEFEH ENEYNKELLV LVRAFKSITQ DSVRSKVLSL VKTMSQAYGE EKDE
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