Gene NSE_0222 details

Gene Information

• Locus tag: NSE_0222
• Symbol: carB
• ID: 3931728
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 186097
• End bp: 189318
• Gene Length: 3222 bp
• Protein Length: 1073 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637900378
• Product: carbamoyl-phosphate synthase, large subunit
• Protein accession: YP_506117
• Protein GI: 88608549
• COG category: [E] Amino acid transport and metabolism; [F] Nucleotide transport and metabolism
• COG ID: [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
• TIGRFAM ID: [TIGR01369] carbamoyl-phosphate synthase, large subunit; [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.256001
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAAA AAAAGTCTAC TATACTTGTG ATAGGAGCTG GTCCAATAGT AATAGGGCAG 
GCGTGTGAAT TCGATTACTC TGGTACGCAG GCATGTAGAA TCCTGAGGAA ATGCGGGTAC 
AAAGTGGTCC TAATAAATCC CAATCCAGCG ACTATAATGA CGGATCCTGA TACAGCCGAC 
GTTGTCTATA TAGAGCCAAT CAACATTGGG ATAATAGAGA GAATAATTGC CATAGAAAGA 
CCTGATAAAC TATTGCCGAC TGTTGGAGGT CAGACAGCGC TAAATATAGC AATTGAGTTA 
TTCGATAGAG GGATACTTTC CAGGTACGGT GTTGAACTAA TAGGGGCCTC AAAACGTGTA 
ATTGAAAATG CAGAGAAAAG AAGCGTTTTC AATCGACTCA TGGGCGAGAT TGGCTTACAG 
GTCCCGAAAA ACACTATGGT TACCCATGTA AATGAAATAG AAAAGGCTTT TGAATTTATC 
GGTGTCCCAG CAATAATAAG GCCATCTTTT ACCCTTGGTG GACTGGGTGG AGGTGTTGCA 
ACTACAAAGT TTGACTTTTT CACGATTATC AATAATGGGC TTAAATTTTC ACCAGTCAGT 
GAGGTACAAG TCGATGAGTC AGTCTTAGGG TGGCAAGAGT TTGAGCTCGA GGTTGTTCGT 
GATTCTGTTG GGAATTCAAT TATTGTTTGT TCCATAGAAA ACACCGACCC AATGGGTGTT 
CATACTGGTG ATAGTGTAAC AGTCTCGCCT ATTCTTACAC TCAGAGACGA AGAATATCAG 
GAGATGAGGG ATGCAGCCTT TAAGGTTTTG GATTGCATAG GTGTTACCAC CGGTGGTGCA 
AACGTGCAGT TTGCTTTGAA TCCGGAAAAT GGTGAACTGC GTGTAATCGA AATGAATCCA 
AGGGTTTCCA GATCATCGGC TCTTGCCTCG AAAGCAACTG GGTATCCAAT CGCAAAGGTT 
GCAGCACAAC TGGCTGCCGG GCTTACTCTG CCAGAAATTT ATAATGATGC AGTTCCAACA 
ATTCCTGCAT CTTTTGAGCC AGCAATGGAC TATGTGGTTG TAAAAATACC TCGCTTCAAT 
TTTGAGAAGT TTTTCCATGC TGAGGAAAGG CTCTCTAGTT CCATGAAATC TGTAGGGACC 
ACAATGGCAA TTGGGAGATG CTTTCAGGAA GCGTTGCAAA AAGCTTTCAG TTCTTTGGAA 
CAGGGTCTTG ATGGTCTCAA TACTGTACTT GATCTGAATG TTTCCCGTAA GGTTATTGAG 
AGAAAGCTAC GCTCTCTCAT TCCGAATAAA ATTCTTGTTA TTGCAGATGC CATTAGAGCT 
GGTTTTCAGA TCAAGGAGAT TGTGTATTTG AGCAAATACA ATGAGTGGTT TCTTTTGCAA 
ATTGATGAGT TGGTAAATTT AGAAAATGAA ATTAAAAGTG GTAACTTTTC CCCGAATAGG 
CTTCTGATTT GGAAGAAAAA GGGTTTCTCA GATTCTAGGA TAGCATCTCT GAAAGGTTGC 
GATGAAGCCT TTGTAAGGAG TACCCGTAAG AAGATGGCTA TAAGGCCTGT ATTTAAACGG 
GTAGACACGT GTGCTGCAGA ATTTGAAAGC GATATAAAAT ATCTCTATTC CACTTATGAA 
GGTGATACTG TTACTCAGCC AGAATGCGAA GCCTATCCCT CTGATAGGAA GAAAGTAATT 
GTCCTAGGTA GTGGACCAAA CAGAATTGGA CAGGGAATAG AGTTCGATTA TACGTGTGTG 
CATGCGATTT CTGCGATAAA GGAACTCGGC TATGAAGCAA TCATGGTAAA TTGCAACCCA 
GAAACGGTTT CAACTGATTA CGATATCTCG GATAAACTCT ACTTCAGTCC TATGAATGTT 
GAGTCAGTTC TAGACATTGT AGAGAAGGAG TCTGAGAGAG GAGAGCTACT TGGTGTGGTC 
CTGCAGTGTG GTGGACAGAC ACCTCTCAAG CTTGCAAGAG CGATGCATGA AAATAACGTC 
AGGATAATTG GTACAGGTTT TGCATCGATC AATACTGCCG AGGATAGAAA AAGTTTCAAT 
AGCCTAGTGG CAGAATTAGA AATGCTTCAG CCAGAAAATG CGATCGTTTT AGCACGAGAA 
GAAATAGCTA AAAATGTTAA AAAAATTGGT TTTCCATTAA TAGTCCGGCC TTCCTATGTA 
CTTGGTGGTG AGTCAATGCA GATTATCTAT GACGACGCGA TGCTTGAAGA TTATTTGGAA 
AGGCATACGC AGCTCTTCAG CGGTTCTTCG TTATTGTTAG ATAAGTTTCT GGTAAATGCT 
CTGGAGCTCG ATGTTGACGC AATTTCTGAT GGCGAAGATG TGTACATTGC CGGTATAATG 
GAGCACATAG AGGAAGCAGG TGTGCACTCT GGTGATTCTG CCTTTGTTTT TCCTCCTCAA 
AAGTTGTCCG AAGAAATACT TGAGAGAATT AAGAGTTGCA CTAAAAAGGT AGCGATTGCT 
CTCAATGTAG TAGGATTTTT GAATATCCAG TTTGCAATAG ATGGAAGGGA TGTATACGTG 
TTAGAAGTAA ATCCACGTTC AAGTCGGACT ATACCATTTG TTGCTAAAGC CCTTGGAATC 
CCGGTTGCAA GAATTGCGAC CAAAGTCATG CTCGGCATGA AGCTAAGAGA TTTCCAGCTG 
AAGGGCTACG AAGACTACGT GAAACATGTT TTTGTAAAAC AGCCTGTTTT TTCGTTTGAG 
AAATTTCCAG AATCTGACGT TCTCCTAGGA CCAGAAATGA AGTCAACAGG GGAAGTAATG 
GGTGTTGGTG ATGATTTTGA TACCGCCTTT GCAAAGGTTT GTATGGCCAG CATGAGGAAA 
CTTCCGACTT CAGGGAAGGT GTTTTTCTCC ATTAGAGATG AAGACAAGCT CAAGTCTGTT 
GAGGTTGCAA AGATATTATC CGAATTGCAA TTTACAATTC TTGCAACAAA GGGGAGTGCA 
GCCTTTCTCG AGAAGCATAA TATCGACGCG GTAACTGTGA ACAAGGTAAA GGAAGGTTCT 
CCGCACGTTG TCGATATGAT AATGAATAGT GAAATTAGTT TAGTGATAAA TACATCTTCT 
CATGTGCTAG AGTCTGTGAG AGACAGTATG AGTATTAGGT CTAGTTCTAT TATTAACCAG 
ATACCATGTT GTACAAATAT TCACTCTGCT CTGGCTCTAG TGAGGGGTAT AAAAAAAATT 
GTTAAGTGTA AGCTGCCGGT TTACCAGCTT TCCTATGTGT AA 

 

Protein sequence

MQEKKSTILV IGAGPIVIGQ ACEFDYSGTQ ACRILRKCGY KVVLINPNPA TIMTDPDTAD 
VVYIEPINIG IIERIIAIER PDKLLPTVGG QTALNIAIEL FDRGILSRYG VELIGASKRV 
IENAEKRSVF NRLMGEIGLQ VPKNTMVTHV NEIEKAFEFI GVPAIIRPSF TLGGLGGGVA 
TTKFDFFTII NNGLKFSPVS EVQVDESVLG WQEFELEVVR DSVGNSIIVC SIENTDPMGV 
HTGDSVTVSP ILTLRDEEYQ EMRDAAFKVL DCIGVTTGGA NVQFALNPEN GELRVIEMNP 
RVSRSSALAS KATGYPIAKV AAQLAAGLTL PEIYNDAVPT IPASFEPAMD YVVVKIPRFN 
FEKFFHAEER LSSSMKSVGT TMAIGRCFQE ALQKAFSSLE QGLDGLNTVL DLNVSRKVIE 
RKLRSLIPNK ILVIADAIRA GFQIKEIVYL SKYNEWFLLQ IDELVNLENE IKSGNFSPNR 
LLIWKKKGFS DSRIASLKGC DEAFVRSTRK KMAIRPVFKR VDTCAAEFES DIKYLYSTYE 
GDTVTQPECE AYPSDRKKVI VLGSGPNRIG QGIEFDYTCV HAISAIKELG YEAIMVNCNP 
ETVSTDYDIS DKLYFSPMNV ESVLDIVEKE SERGELLGVV LQCGGQTPLK LARAMHENNV 
RIIGTGFASI NTAEDRKSFN SLVAELEMLQ PENAIVLARE EIAKNVKKIG FPLIVRPSYV 
LGGESMQIIY DDAMLEDYLE RHTQLFSGSS LLLDKFLVNA LELDVDAISD GEDVYIAGIM 
EHIEEAGVHS GDSAFVFPPQ KLSEEILERI KSCTKKVAIA LNVVGFLNIQ FAIDGRDVYV 
LEVNPRSSRT IPFVAKALGI PVARIATKVM LGMKLRDFQL KGYEDYVKHV FVKQPVFSFE 
KFPESDVLLG PEMKSTGEVM GVGDDFDTAF AKVCMASMRK LPTSGKVFFS IRDEDKLKSV 
EVAKILSELQ FTILATKGSA AFLEKHNIDA VTVNKVKEGS PHVVDMIMNS EISLVINTSS 
HVLESVRDSM SIRSSSIINQ IPCCTNIHSA LALVRGIKKI VKCKLPVYQL SYV