Gene NSE_0217 details

Gene Information

• Locus tag: NSE_0217
• Symbol: rpiB
• ID: 3932019
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 183158
• End bp: 183616
• Gene Length: 459 bp
• Protein Length: 152 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637900373
• Product: ribose 5-phosphate isomerase B
• Protein accession: YP_506112
• Protein GI: 88608285
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00182493
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAACGTGA GGGTTTCCAT AGGTGCTGAT CATGCGGGGT TTGCACTCAA AGCAGTTTTG 
ATAGACTTCT TTAGGGCACG GGGATGCTTG CCCGTGGATA GGGGTGCGTA TTGCTTAGAT 
GTTTCTGATT ATCCTGATTT TGCTAAATCT GTTTCCTTAG ACGTATCGGA TGGGAGGGTG 
GATTTTGGCA TCTTAATATG TGGTTCTGGT ATCGGGATGA GTATAACCGC CAACAGGTAT 
AAAAAGGTCC GGGCTGCTCT GTGTTATGAT GTGCGAGCAG CAAAGATGGC TAGGGAACAT 
AATGATGCAA ATGTCTTATG TCTTGCAGGA AGAGATCTGA CTGTATCAAG GTGTCTTGAA 
ATAGTTGAGG CATTTGTAAG TAGTAAGTTT AGTTGTGAGG AGCGTCACAA GAAAAGGATA 
GAAAAAATTG ATGAGGGGGG GGGGAATAGT GTTTTTTAA 

 

Protein sequence

MNVRVSIGAD HAGFALKAVL IDFFRARGCL PVDRGAYCLD VSDYPDFAKS VSLDVSDGRV 
DFGILICGSG IGMSITANRY KKVRAALCYD VRAAKMAREH NDANVLCLAG RDLTVSRCLE 
IVEAFVSSKF SCEERHKKRI EKIDEGGGNS VF