Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0210 |
Symbol | virB9-1 |
ID | 3932149 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | - |
Start bp | 178418 |
End bp | 179218 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637900366 |
Product | type IV secretion system protein VirB9 |
Protein accession | YP_506105 |
Protein GI | 88608055 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.332036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAGAT CCAATAATTT TGCCATCTTA CTCACACTAC AGTTCATGCT CTGTTTACCC GTGTTTGCTG ACCAAAAGGC TCACTCGTTG GCTTCTACTC CGCATATAAA AGAGATGGTT TACAATCCAA ATGGTATTCA TACGTACACT GGGTTTTTCG GCTACCAGTC CAGCATAGTT TTCGAGGATG GAGAGGTGAT AAGTACTATT TCTATGGGCG ACTCCACTGG TTGGCAGCTT GATACTCAGG GCAATAGACT CTTCCTTAAA CCCGTCGAAG ACAACGCGAC AACAAACGTC ACGATTCTTA CAAGCAAGCG GGTTTATCAT TTTGTCTTCA ACGCCAAGGA AGCTCGGGAT GTGTACGATC CAGAGCTAGC ATACGAAGTA CGTTTCCGAT ATCCTTCGCA TGCTGTCAGT ATACAAAGCG CTGGTATTAC AGGCGTGCAG AACGAAACAG TGGGAAGTAC TGAGCTTGAC ATTGGCAAAA AAGCATATCT GAATTTTGAG TATAAGCTTT CTGGGTATGA TGCAATAAAA CCACTCAAAG TTTTTGATGA TGGACGCTTT ACTTATATGC AGTTCCCAAG TGTAAATGCA AACCTGCCGG CTGTTTTCCG AGTTGATTCG CAAGGATATG AGGCTTTGGT GAATTACCAT ATTTCGGGCA AATATCTGGT AGTGCAAGAG GTTGCACCAT TGTTCACATT GCGTCATGGA AATGATCACG TGTGTGTTTT CAACATGAAA GCTGCCATTA AGAAAAGAAA GGGCAGTACT AAGGTTTTTA CAAATGGGTA A
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Protein sequence | MKRSNNFAIL LTLQFMLCLP VFADQKAHSL ASTPHIKEMV YNPNGIHTYT GFFGYQSSIV FEDGEVISTI SMGDSTGWQL DTQGNRLFLK PVEDNATTNV TILTSKRVYH FVFNAKEARD VYDPELAYEV RFRYPSHAVS IQSAGITGVQ NETVGSTELD IGKKAYLNFE YKLSGYDAIK PLKVFDDGRF TYMQFPSVNA NLPAVFRVDS QGYEALVNYH ISGKYLVVQE VAPLFTLRHG NDHVCVFNMK AAIKKRKGST KVFTNG
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