| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0191 |
|---|
| Symbol | |
|---|
| ID | 3931956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Neorickettsia sennetsu str. Miyayama |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007798 |
|---|
| Strand | - |
|---|
| Start bp | 160394 |
|---|
| End bp | 161377 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637900347 |
|---|
| Product | PerM family permease |
|---|
| Protein accession | YP_506086 |
|---|
| Protein GI | 88608019 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.739217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTCG CCTTCGCATT TTCATTTATT CTCGCGTATT TTTTGAATCG CTCTACGACA
AAGCTAGCAG CTCTCATTGG ATCTAGAGGT ATCGCATCCT TACTTGTTGT TGCTTTTCTC
AGCATACTTG TCATCCTTGT TTTCTCACTT GCTATACCTC TTCTTTATCA TCAACTGATT
CTCTTTCTTA AAGGAGCACC GCAACTAATT GCATACATAG AAAACTCAAT TAAAATCTCT
TCTCCAGGCC TACATAGTTT TCTCGAAGAA AGGGGAATGT CCTCCTTATT TGAGTACATC
TTATCTCTTG TGCCACAGCT CTCGACTAAG ATTACGCAAC ATTTATGGAA TTCAACGCTC
GTTTTAGCAA ACATTGTGAT CTTACTAATT TTCACTCCTG TAATACTCTT TTATCTCCTC
CAGGACTGGC CAAAAATGAC AAACGCTATA AAGGAAATCA TACCTCTGAA ACACAGAACT
GCCTTCAGCA ACCAGGTTAC ACTGATGGAC GCAAGCATTT CCGGATATGT ACTAGGACAG
ATGAAGATTT CGTTTATTTT AGGTGTGTTG TATACAGTAC TGCTCTTTTT TGCAGGAATG
CCATATTATT TCCTAATTGG TGTATCTACG GGAATGCTAA CAATTATCCC ATATTTTGGG
AACATAACGG GTCTTATAAC GAGCCATCTA GTTGCTCTGT CTCGTGCCTC AAGTATCCTA
GATGTGTTAC CAATCACGCT GATCTTCATC TTTTGCGGCG CAATTGAAGG TCTGTTCCTA
TCACCAAAAC TTCTAAGTAA GAGTGTGAAC CTGCACCCAT TATGGGTAAT CTTCTCTATG
ACAGTCGGGG GTATGCTGTG CGGACTAGCA GGAATATTAC TGGCCGTTCC TGTTGCAGCA
ACCGTTGCAG GATTTGTGCG ACTAGGTATT TCTTACTACA AAGATAGCTC CTATTATAGA
GATGAGGCAA CTAATACTGA TTGA
|
|---|
| Protein sequence | MLFAFAFSFI LAYFLNRSTT KLAALIGSRG IASLLVVAFL SILVILVFSL AIPLLYHQLI
LFLKGAPQLI AYIENSIKIS SPGLHSFLEE RGMSSLFEYI LSLVPQLSTK ITQHLWNSTL
VLANIVILLI FTPVILFYLL QDWPKMTNAI KEIIPLKHRT AFSNQVTLMD ASISGYVLGQ
MKISFILGVL YTVLLFFAGM PYYFLIGVST GMLTIIPYFG NITGLITSHL VALSRASSIL
DVLPITLIFI FCGAIEGLFL SPKLLSKSVN LHPLWVIFSM TVGGMLCGLA GILLAVPVAA
TVAGFVRLGI SYYKDSSYYR DEATNTD
|
|---|
| |