Gene NSE_0176 details

Gene Information

• Locus tag: NSE_0176
• Symbol: hslV
• ID: 3931981
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: +
• Start bp: 145277
• End bp: 145843
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637900332
• Product: ATP-dependent protease peptidase subunit
• Protein accession: YP_506071
• Protein GI: 88608110
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTACTG GGTTTCATGG GACTACTATT CTTTCGATCA GAAAGGATGA CAAGGTCGTC 
ATGATAGGTG ATGGACAAGT GACTATGGGA AATGCAGTCG TTGTAAAATC GACTGCACAG 
AAAGTGAAGC GTCTTTCAAA TGGGAAGATA ATATCGGGTT TTGCTGGATC AACTGCGGAT 
GCATTCACAT TATTTGAACG CCTAGAGTCA AAATTGGAAG CTCATCCGGG GCAACTTCTG 
CGTGCGTGTG TGGAACTTGC GAAAGATTGG CGTACGGATA AATTTCTTCG TCGGTTAGAG 
GCGATGATGA TTGTAGCTGA TGCTAGGGGT ACGCTCATTC TGAATGGTGC TGGTGATGTG 
ATAGAGCCTG AGGATAGTGT TGCTGCTATT GGATCTGGGG GCAACTATGC TCTAGCTGCT 
GCTAAAGCGC TTATAGTTCA CGCCAGTGAT CTTGATGCTT TTCAGATTGC TGAAGCGGCT 
ATGAAAATAG CTGCTAAGAT CTGCGTTTTT ACAAATGAAA ATTTTACGGT TGAAGTCATC 
GATTGTGCTT CAAAAGAGTG TAGTTGA 

 

Protein sequence

MGTGFHGTTI LSIRKDDKVV MIGDGQVTMG NAVVVKSTAQ KVKRLSNGKI ISGFAGSTAD 
AFTLFERLES KLEAHPGQLL RACVELAKDW RTDKFLRRLE AMMIVADARG TLILNGAGDV 
IEPEDSVAAI GSGGNYALAA AKALIVHASD LDAFQIAEAA MKIAAKICVF TNENFTVEVI 
DCASKECS