Gene NSE_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNSE_0175 
Symbol 
ID3931930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNeorickettsia sennetsu str. Miyayama 
KingdomBacteria 
Replicon accessionNC_007798 
Strand
Start bp143960 
End bp145231 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content43% 
IMG OID637900331 
ProductM16 family peptidase 
Protein accessionYP_506070 
Protein GI88607993 
COG category[R] General function prediction only 
COG ID[COG0612] Predicted Zn-dependent peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAAACC TAGTTCAGAG ACGTCTTGGA AATAATCTAC CAGTTTTTGT GGATAGTATA 
TCAGGGCATT ATTCCGTTTC AATAAAGGTT TGGGTCAGAG CTGGTAGTGA ATGTGAAACT
CAAGAAAATG GTGGATTGGC ACACTTTCTT GAACATATGA TTTTCAAGGG CACAAGCACA
CGAAATGCAG CACAAATAGC TGAAGATTTT GATCGACTTG GAGGTTATTT CAATGCCTGT
ACTAGTAGGG GTTATACGGT TTACTATGTA AGGCTGTTGG AAGAGCACCT AGATAAGGGG
ATGGAGATTC TTTCCGACGT GATCAACAAC TCGATCTTTC CAGAGGAAGA GCTTGAGCGT
GAAAAATTGG TTGTCCTAGA GGAGATTTCT CAAACTGAGG ATGCACCCGA CGATATTATC
TTCGACCGTT TTTTTGAGAG CATATATCCG AATCAAGCTT ACGGACGGCC TATTCTTGGT
TCTAGGGAGA ATGTTAAACG CTTTACAAGA AATGACATCG CTTCTTTCAT ATCTCAGCAC
TACTACTCTG AGAATATGAT GCTCATTGCG TCCGGCAAAG TGGATGCTGA GAGATTTATC
TCACTGGCGG AGAAGTATTT TGGAGGTATA AAATCAATCA GCAGACGCGC CGCAAATAGG
TTACCGGCAA AGTATGTTCC TGTTGAATAT AGAGAAGAGC GCAAGTTAGA GCAGACCCAT
ATCATTCTAG GATTGCCATG TGTTTCTTAC TCAGATGGTA TCTCTCAGGT ATATTCTGCT
AAGGTTCTTG CTATACTCTT TGGCGGTGGT ATGTCTTCTA GATTGTTTCA AGAGGTGCGA
GAAAAACGTG GTCTAGCTTA CTCTATAAGC GCTTTTCATG CACCGAGTGA GACCTCAGCA
ATTATGGGTG TTTACTCTTC TACGGATCCA AAGAGACTAA AAGAGCTGGT TGCAGTGGTC
CTTGGTGAAT TGGCTAAGCT TCGGAATACT CTTACGATCG AGGAGGTTGA AAGCGCAAAA
CAGCAAATTA AGTCGTCGAT TTTGATGAGT CTGGAAAGTA ATGAGTCTCG TGCGTCTCAT
ATAGGTAGGT CGATTCATTA CTTTGGCAGG TACATAGATG GAGCCGAGCT GATCGAAGTT
ATTGATGCTG TTGAAGTTGA TGATGTTGCC TCAATTACAG AGTTTATGTT GCGGGGTAAG
CGCTTGAGCC TTGCGTTGAT TGGTGCAAAA GATGTATTGG ATGAGCGCGG AGTGTTAGCA
GAAGCGCTGT AG
 
Protein sequence
MQNLVQRRLG NNLPVFVDSI SGHYSVSIKV WVRAGSECET QENGGLAHFL EHMIFKGTST 
RNAAQIAEDF DRLGGYFNAC TSRGYTVYYV RLLEEHLDKG MEILSDVINN SIFPEEELER
EKLVVLEEIS QTEDAPDDII FDRFFESIYP NQAYGRPILG SRENVKRFTR NDIASFISQH
YYSENMMLIA SGKVDAERFI SLAEKYFGGI KSISRRAANR LPAKYVPVEY REERKLEQTH
IILGLPCVSY SDGISQVYSA KVLAILFGGG MSSRLFQEVR EKRGLAYSIS AFHAPSETSA
IMGVYSSTDP KRLKELVAVV LGELAKLRNT LTIEEVESAK QQIKSSILMS LESNESRASH
IGRSIHYFGR YIDGAELIEV IDAVEVDDVA SITEFMLRGK RLSLALIGAK DVLDERGVLA
EAL