| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0167 |
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| Symbol | dnaE |
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| ID | 3932104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 134937 |
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| End bp | 138170 |
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| Gene Length | 3234 bp |
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| Protein Length | 1077 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900323 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_506064 |
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| Protein GI | 88608539 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCGGC AGACATTCGT ACATCTTAGA GTACGAAGCG ATTATTCGCT CTTGAGGGCA
GTAACCAAAC CTAGGAGAAT TGTTGATCTG GCCCGTGCTG CTGGTATGCC AGCTGTGGCG
CTCACTGATA TTGATACAAT GGCAGGGGCG CTTGAGTTTG CTGAGTATGC TAAGGCTTCT
GGTATTCAGC CGATTATTGG GATTGATCTT TCGATTTCAC ATAATCGTGT TGATTCACGT
GTACTCTTGA TTGCAAAAAA CGAAGAGGGC TATCACAACA TGATTAAGCT TTCTGGGATA
GTTTCCTTGC GGAGAGTTGC GCTGAATGAG GTTTTCACAC ATAGCAAGGG TCTAATTCTT
CTGCTAGGAG AGTTCTTTAT TGATGCTATC AACAGTTACT CGATTGATGC AGAAACTTTG
GTATCCGATC TAAAGCAAGT TTTTGGTAAG GACCTTTTTG TCGAAATACA ACGTTTGGGT
AATCAATCTG CAGAGGAAAA ACTTATTCAA CTTGGATATG AGCATAATAT TCCTTTTGTT
GCTACGAACG ATGTTCTTTT TCCAGATACG GATTTCAGGG AGGCGCATGA CGTATTGACT
TGCATAGGAA GCCTTACGTA TGTCAACGAT ATAAACCGCG TACATTACTC TCCAGAATCG
TATTTTAAAA GTGCAGAGGA AATGATTGCA CTTTTTGCTG ATTTGAAGGA GGCGCTGCAC
AATACTGTCT TGATAGCGCG TCGTTGTAGC TTTATGCCAG AAGTGAGAAG TCCTATTCTG
CCCAAGTTTG AATGCGAAAT GGACGAGAGC GATGAGTTGA GGCGTCTAAG TTACATTGGC
TTACACAGAA GGATGGGGGC TGATGTTCCA CAAAATTATT TGGACAGGCT TGAGTACGAG
CTTGGTATTA TCATTGACAT GAATTATGCT GGCTACTTTT TGATAGTGGC TGATTTTATA
CGTTGGAGTA AGGCCAACGG CATCGTCGTT GGTCCTGGAA GAGGATCTGG AGTCGGATCA
ATAGTTGCCT GGTGCCTCGG TATTACCGGT TTAGATCCAC TGAAATTTGC CCTTTTTTTT
GAGAGGTTTT TGAATCCGGT TCGTGTATCG ATGCCGGATT TTGATGTGGA CTTCTGTCAG
GAAAAGCGCC ATCTTGTAAT AGAGTACGTG AGAAAAAAAT ATGGTCACGT TGCTCAAATA
ATGACTTTTG GTACCCTCCA GCCCAGAGCT GCGTTGCGAG ATGTTGGAAG GGTGCTCCAG
CTACCGTATG GTCGAGTCGA TAGGATCTGT AAAATGATTC CTAACAATCC CGCTAATCCG
ATTTCTCTCC AGGAAGCAAT AAATCTTGAC AAAGATCTCC AAAGAGAAAG TGAAGATGAT
GAATCTATAG CAAAGTTGCT TGATCTTGCT CTTAAGTTGG AAGGAACGCT AAGACATACC
TCTACCCATG CTGCTGGAAT AGTTATTAGT GATACTCCGA TAGAGGATTA TCTTCCCGTT
TACCACGACA AGGAGTCAGA TATTCCAGTT ACCCAATATT CGATGAAATA TGTTGAGAAA
GCAGGATTAA TAAAGTTTGA TTTTCTTGGT TTGAAAACGT TAACAGTGAT CAATCAGGCG
TGCTTGTTGG TACGCTTAAA AAATCCCAAT TTTGATATAG ATTCTATTCC TCTTGACGAT
AAGAGAACGT ATGACCTTCT TTCAGCAGGA AATGCGATAG GTGTATTCCA GTTGGATAAC
GCATACATGT GTGAGACGCT AAAACGTCTG CACCCGGACT GTTTTGAAGA TATAATTGCC
CTGATCTCGC TTAATAGGCC TGGTCCTATG GCGAATATTC CGACATATAT AGCAAGAAAA
CATGGAAAAG AGGCAGTCAA ATATCCACAT CCGCTACTTG AGTCTTCATT GAAGGAAACT
TTTGGTGTTG TCATCTATCA AGAGCAGGTA ATGGAAATGG TTAGGCTTCT TGCTGGGTAT
ACACTAGCCG AAGCAGATAT TCTCCGACGT GTTATGGGTA AGAAAATACG CGCGGAAATG
TCAGAGCAAG CCGAGAAATT TGTCGAGGGT GCAAAACGTA ACGGAATCGA GACAGAAAGA
GCTCAAGAAA TTTTCGAGAT GATAGAAAAA TTTGCTGGCT ATGGTTTTAA TAAGTCGCAT
GCTGCTGCAT ACGCGCTAAT CTCATATCAA ACAGCCTTCC TCAAGGCTAA TTTTCCAATC
GAATTTACCA CGGCCGCTCT TAACCTTGAA TTGCACCATA CAGACAAGCT CGCAATCCTA
ATACAAGATG CAAAAAATTA TGGTATCACA ATTCTGCCTC CAGATATAAA TAAGTCAAAA
ATTTTATTCT CTATTGAAGA TAATGCGATA AGGTACTCGC TTGCAGCTTT GAAGAATGTT
GGAGAAGCTG CAGCTTCAGC AATACAGAGA AGAAGTCCGT TCGCAACAAT TCCAGAACTT
CAAAGGTGCT TGGATGGAAA AATAGTTCAT AGAAAGGCTG TTGAAAGTCT CATAAAGTCA
GGTGCTACGG ATGTACTTTC TCCTGATAGG AGTGGACTTT ATTCTTGTCT GAAGGAATTA
GTGGGAAAAG AGGATGATGG TGCACAGATG ACATTATTTG ATATCTCTGT GAACAAACCG
GAAAAGACCG TAAAGCCCTG GAATTTTTTT GAAAGGACAC AGTGTGAATT TGATGCCTTT
GGCTTTTTTC TTTTTGATCA CCCTCTCTTT CCATATCGAA AGTTTTTAAA GCTTTCTCCG
AATCAGATTG CTGGTGTGAT AACTGAACTA AGGATAAGGT CCAGAGGGGA CAGAAAGTTT
GCTGTGATGC ATGTTTCAAC AGTAAACGAC ATATACACTG TTATGTTTTA CGAGTCCGAC
GTTATAGATT CCAGACGTGA ACTTTTTGTA GTTGGTGTGA AAGTCGTACT GACTCTCTTA
AAGAGTGATA ATGGCTATGT ATGTACCAAT TTAGCTGAAT TACACGAATT TATCTTTTCG
AATTATAACG GAAGATTTGC AATTCTCGTA AATCGCAAAG AACAGGTCAC TGCACTGAAG
GATGTTCTAA GGCGTGGTGG TAAGTATGAG GTTACACTCG TTGTGCGTAA CGATTCTCAA
TACACGAGAA TTGTTCTAGG ACATGACTTT GATCTTGCAG TTGACAAGCT TGCATTAATT
GAAGGTGTGG AGATTCTCAA GTACAGGGTA TGCTGCAGCG ATATGATCAA TTAG
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| Protein sequence | MRRQTFVHLR VRSDYSLLRA VTKPRRIVDL ARAAGMPAVA LTDIDTMAGA LEFAEYAKAS
GIQPIIGIDL SISHNRVDSR VLLIAKNEEG YHNMIKLSGI VSLRRVALNE VFTHSKGLIL
LLGEFFIDAI NSYSIDAETL VSDLKQVFGK DLFVEIQRLG NQSAEEKLIQ LGYEHNIPFV
ATNDVLFPDT DFREAHDVLT CIGSLTYVND INRVHYSPES YFKSAEEMIA LFADLKEALH
NTVLIARRCS FMPEVRSPIL PKFECEMDES DELRRLSYIG LHRRMGADVP QNYLDRLEYE
LGIIIDMNYA GYFLIVADFI RWSKANGIVV GPGRGSGVGS IVAWCLGITG LDPLKFALFF
ERFLNPVRVS MPDFDVDFCQ EKRHLVIEYV RKKYGHVAQI MTFGTLQPRA ALRDVGRVLQ
LPYGRVDRIC KMIPNNPANP ISLQEAINLD KDLQRESEDD ESIAKLLDLA LKLEGTLRHT
STHAAGIVIS DTPIEDYLPV YHDKESDIPV TQYSMKYVEK AGLIKFDFLG LKTLTVINQA
CLLVRLKNPN FDIDSIPLDD KRTYDLLSAG NAIGVFQLDN AYMCETLKRL HPDCFEDIIA
LISLNRPGPM ANIPTYIARK HGKEAVKYPH PLLESSLKET FGVVIYQEQV MEMVRLLAGY
TLAEADILRR VMGKKIRAEM SEQAEKFVEG AKRNGIETER AQEIFEMIEK FAGYGFNKSH
AAAYALISYQ TAFLKANFPI EFTTAALNLE LHHTDKLAIL IQDAKNYGIT ILPPDINKSK
ILFSIEDNAI RYSLAALKNV GEAAASAIQR RSPFATIPEL QRCLDGKIVH RKAVESLIKS
GATDVLSPDR SGLYSCLKEL VGKEDDGAQM TLFDISVNKP EKTVKPWNFF ERTQCEFDAF
GFFLFDHPLF PYRKFLKLSP NQIAGVITEL RIRSRGDRKF AVMHVSTVND IYTVMFYESD
VIDSRRELFV VGVKVVLTLL KSDNGYVCTN LAELHEFIFS NYNGRFAILV NRKEQVTALK
DVLRRGGKYE VTLVVRNDSQ YTRIVLGHDF DLAVDKLALI EGVEILKYRV CCSDMIN
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