| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0166 |
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| Symbol | |
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| ID | 3932058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 133504 |
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| End bp | 134925 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637900322 |
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| Product | periplasmic serine protease |
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| Protein accession | YP_506063 |
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| Protein GI | 88608224 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.358427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGAA ATAGGTTTTA TGAGATATTT TTCCTAGCTG TACTTTTGAA CTGTTCTTTT
GCTGCTGGGG CTGTGCCATC TGAGGGATTT TCTGATGTTG TCTCAAGGCT TGCTCCTGCG
GTTGTGAATA TTTCCAGCGA ATACAGGTTA AGGATGGATA ACCAGGGTCT GTGTGGTAAC
CCGGCTATTT TGGAAGAGTT TTCTGAATTT TGTGAGCGCC TTAAGCCGTT TTTTCGCAAC
AAGAATCCGG GTAAGAAGTA TGGGACATCT TTGGGTTCTG GCTTTTTGAT TTCCGATGAT
GGGCTTATAG TTACGAATTA TCATGTCATT GCGAATGCTG ATAAAATCAG GGTCGTTCTG
AGTCAGTGTA GTGAAGCGTG CCAACAGTAT GAGGCTACGG TGATTGGGTA TGATAAAAAA
ACCGACCTTG CTGCGCTAAA AATTTCTGGA GTAAGTGGTC TTCCATATTT GCGTTTTGGT
GATTCGTCTA AAATGAGGCC CGGGGACTGG GTGATAGCAG TTGGTAATCC TTTTGGTTTA
GGGGGCTCTG TCAGTGCTGG AATTGTTTCA GCGATCAGTA GAGAGATCGG TCTATCTCAG
AACAGCGATT TTATACAGAC GGACGTTGTG CTCAATTCTG GTAATTCTGG AGGACCGCTT
TGTAATGCAA AGGGTGAAGT AATTGGTGTA AATACGGCTG CTGTGTATTC TAATGGTGGA
AGTGCAGGGA TTGGTTTTGC CGTGCCATCG AATGTTGCGA AGCCAGTGAT AGAAGCTCTA
GCTAAGGGTA AGCAGATTCA GCGTGGATGG ATAGGGATTG TCATCCAAGA GATCACAAAC
GAAACAAAAG ACTCACTTGG TGGAGACTTA TCCGGTGTTC TGGTGGCGAG TGTTGAAAAA
GATGGACCTG CGTATAAAGC TGGGATGAGG GTTGGAGACG TTATTACAGC TGTGAACGGG
GAGAAAATTA GCGGTTCAAG GAGATTAGTA AGGGAAGTTT CCGGGCGGAG AATAGGTGAT
ACAATAGAAC TGTCTGTAGT CAGGGATGCT CTTAAAAATA AGGAGACGGT GTCTTTGAAG
GTAAAAATTG AAAAAACACC GCAAAGGTAT GCAGACGATG GGGCATCGCA GTTAGAGGTC
ATAGGATTAG TGGTTTCCAA TCTGACTGAT ACGATTAGAA ATTCGTTTGG GCTTGGTGCT
AGCATTGAAG GGGTGGTGGT CTTGGCCGTT GATCCTGACA AAGAGAGTTT TCTCAAAGCT
GGGGATATAA TTATTGGGGT TGGTACCAAC AGGCAGATTT CTACTGTCCA GGAGTTTAAA
CAGCACATAG ACGAAGCAAA GAAAAAGGGG CAAAGGTCGC TCCTAATGCT GATAAATCGT
GGTAAGCAGA CGATCTTTGC GGCTGTAGGC TTGGATAACT AG
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| Protein sequence | MRRNRFYEIF FLAVLLNCSF AAGAVPSEGF SDVVSRLAPA VVNISSEYRL RMDNQGLCGN
PAILEEFSEF CERLKPFFRN KNPGKKYGTS LGSGFLISDD GLIVTNYHVI ANADKIRVVL
SQCSEACQQY EATVIGYDKK TDLAALKISG VSGLPYLRFG DSSKMRPGDW VIAVGNPFGL
GGSVSAGIVS AISREIGLSQ NSDFIQTDVV LNSGNSGGPL CNAKGEVIGV NTAAVYSNGG
SAGIGFAVPS NVAKPVIEAL AKGKQIQRGW IGIVIQEITN ETKDSLGGDL SGVLVASVEK
DGPAYKAGMR VGDVITAVNG EKISGSRRLV REVSGRRIGD TIELSVVRDA LKNKETVSLK
VKIEKTPQRY ADDGASQLEV IGLVVSNLTD TIRNSFGLGA SIEGVVVLAV DPDKESFLKA
GDIIIGVGTN RQISTVQEFK QHIDEAKKKG QRSLLMLINR GKQTIFAAVG LDN
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