| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0144 |
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| Symbol | xerD |
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| ID | 3931639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 115865 |
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| End bp | 116782 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637900300 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_506043 |
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| Protein GI | 88608752 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAGCGA GTGATTGCAA ATATGTGGAA CAGTTTCTGG AAAAGATCCT GGTTGAGAGA
AATGCCACAC TTAACACGAT CAGCAGCTAT CGGACCGATC TTAGATTGTT AAGCACCTTT
CTCAAAAAAA GGGGTCTAAA AGATGCATCA AAAGAGAATT TATATGAATA CATCGCCAAC
TTGCGAGCTC AACAGCTCTC CAATGCAACA ATACGAAGGA AAATAGCGAC TTTTAGACAA
TTTTTCTCAT TCTTATACTC CGAAAAAATC TCCAGTACCA ATCCAGCTCA AAGTCTTGAG
CTTCCCAAAA AGACGTTAGT ACTGCCTAGG TACCTGACCA AAGAAGAAGT TTTCTCCTTA
CTTACTTTCT TAGAAGCAGG GCAGCCTGCA ACCCTACGAT TGTATGCAAT CCTGGAGATC
TTATATTCCT CTGGTATGCG GGTCTCCGAA CTTATAAACA TGAAAGTTTC CGACATACGA
CCGCTTCTTA ATGGGCAGCA GCATATCATC ATTGTTGGGA AGGGTAGAAA GGAGAGAATA
TTGCCATTCT CTAAGAAAGC AATACAAGTG CTCAAGCTGT ATCTAACTTC CTACCAAAGC
AATTCCCCTT GGCTTTTTCC GGGGGCAGGG AGAAAAGATA GACCAATGTC AAGACAAAGG
TTAGGACAGC TCCTGAAAGA ACTTGCACTA AAGTGCAAAA TCGATCCCAA ACGAATTTCT
CCACATGTTA TCCGCCACTC GTTTGCAACA CACCTACTGG ATAATGGAAT GGACATTAAG
GTTGTACAAG ATTTACTAGG ACATGCACAG ATTACAACCA CTCAAATTTA TACCCACATT
TCACAACACA AGCTCCATAA GGAAATTGAA GCAAAGCATC CACTCTCCTC AAAAGAAATC
GGAAAAACAC CTTTTTAA
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| Protein sequence | MQASDCKYVE QFLEKILVER NATLNTISSY RTDLRLLSTF LKKRGLKDAS KENLYEYIAN
LRAQQLSNAT IRRKIATFRQ FFSFLYSEKI SSTNPAQSLE LPKKTLVLPR YLTKEEVFSL
LTFLEAGQPA TLRLYAILEI LYSSGMRVSE LINMKVSDIR PLLNGQQHII IVGKGRKERI
LPFSKKAIQV LKLYLTSYQS NSPWLFPGAG RKDRPMSRQR LGQLLKELAL KCKIDPKRIS
PHVIRHSFAT HLLDNGMDIK VVQDLLGHAQ ITTTQIYTHI SQHKLHKEIE AKHPLSSKEI
GKTPF
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