Gene NSE_0132 details

Gene Information

• Locus tag: NSE_0132
• Symbol: atpH
• ID: 3931678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Neorickettsia sennetsu str. Miyayama
• Kingdom: Bacteria
• Replicon accession: NC_007798
• Strand: -
• Start bp: 109516
• End bp: 110040
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637900288
• Product: ATP synthase F1, delta subunit
• Protein accession: YP_506032
• Protein GI: 88608208
• COG category: [C] Energy production and conversion
• COG ID: [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)
• TIGRFAM ID: [TIGR01145] ATP synthase, F1 delta subunit

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACAGT ACATAGCCGG TAGATATGCG CAGTCCTTGT ATGCAGTTTG CGGTCCCAGA 
TTGGAGAGTG ATGCTAATAA GTTCTTGGGT TTGCTCAGTG AAAACAACTT CCTTTCTTTC 
GCAAAGGTAA AGACCAGCAC CAAGCTACAT GTGCTTGATA GACTGCATCT CCCGTGCGAA 
CTTAAAAATT TATGTAAGCT CCTTCTTGCA AATCACCGTG GCTTTCTCTG CACTACAGTA 
CTGCTAGGGT ACATAGAAAT AGTGAAAAAA AACAGGAAAG AGGCAGACGC AAGGGTGGAG 
TCGTATAGCC GCTTAAGTGC CACGGCTAAA AAGGAAGTTG CGGATGCACT GCTTATCAAA 
TTCCCTTATC TGAAAAAGAT TAACATCGCT CAAAAAGTGA ATCGCTCTAT CCTGGGCGGA 
CTGACAATTA AAATAAATTC AATAATGATA GACCTTTCCA TCGCTGGAAG GTTAGCAAAA 
TGTAAAAGTA TAGGACAAAG TACAATTCTC GAGATATTTC AATAA 

 

Protein sequence

MQQYIAGRYA QSLYAVCGPR LESDANKFLG LLSENNFLSF AKVKTSTKLH VLDRLHLPCE 
LKNLCKLLLA NHRGFLCTTV LLGYIEIVKK NRKEADARVE SYSRLSATAK KEVADALLIK 
FPYLKKINIA QKVNRSILGG LTIKINSIMI DLSIAGRLAK CKSIGQSTIL EIFQ