| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NSE_0101 |
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| Symbol | truB |
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| ID | 3931563 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Neorickettsia sennetsu str. Miyayama |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007798 |
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| Strand | + |
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| Start bp | 81266 |
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| End bp | 81973 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637900257 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_506001 |
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| Protein GI | 88608670 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.374766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTGG ATGTGAAATT AGATAGCATA GAAGGTTGGC TTAGCTTGGA TAAAGAAAGC
GGAATCTCCT CGTTTGGTGC ATTGAAACTT TTAAAGCGTA AGTTTGGTGT AAAGAAGGCG
GGTTATGTAG GAACATTAGA CCCTATTGCA ACGGGAGTCC TGGTTATTGC TCTTGGCAGG
ACAACAAAGC TTATCCCGCA GTTTGATGAT TCTTTCAAAG AATACGAATT CGCAATTGAA
TGGGGTGCGG AAACAGATAC ACTAGATTCG GAGGGTGCAG TGCTTCGAAA TGGTGGGCTC
ATACCAAGTA CAAGTGCAAT TCTTGGGGTT TTACCGTCAT TTCTTGGTGA GCAGTTACAA
GTGCCACCTA AGTTTTCGGC CATCCACGTA AACGGCCATA GGGCCTATTC ACTCGCCCGA
GCTGGTATAG AGTTTAACAT GCAACCTAGA AGGGTCGTTA TACACAGTAT CGAATGCATG
AATCATTCAG CTGGACAATC AACCTTAAAA GTATCATGTA GTAAAGGAAC TTATGTCAGG
GCGCTCGCTC GGGACATCGC ACGCAAGCTG GAGTCATTAG CATTTGTAAG CAAAATACGC
AGAACAAGAT CAGGCATATT CAACGTTACC AGTGGAAACA AGCTTTCAGA AATTACAAAG
GAGCATATAG TCCCACCAAG TGTGCCACTT TGCAGGCCTA AAGGCTAA
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| Protein sequence | MTLDVKLDSI EGWLSLDKES GISSFGALKL LKRKFGVKKA GYVGTLDPIA TGVLVIALGR
TTKLIPQFDD SFKEYEFAIE WGAETDTLDS EGAVLRNGGL IPSTSAILGV LPSFLGEQLQ
VPPKFSAIHV NGHRAYSLAR AGIEFNMQPR RVVIHSIECM NHSAGQSTLK VSCSKGTYVR
ALARDIARKL ESLAFVSKIR RTRSGIFNVT SGNKLSEITK EHIVPPSVPL CRPKG
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