Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NSE_0100 |
Symbol | lipB |
ID | 3931621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Neorickettsia sennetsu str. Miyayama |
Kingdom | Bacteria |
Replicon accession | NC_007798 |
Strand | + |
Start bp | 80625 |
End bp | 81254 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637900256 |
Product | lipoate-protein ligase B |
Protein accession | YP_506000 |
Protein GI | 88608073 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATGGA AAATTGATAA AGACTGTGTT GATTACCAAA TGTCACTCAT GTTTATGCAA GAGCGGGTGA AGCAGGTTAT TAACGGTTCA GGCGATGAAT TGGTGTGGAT GTTGCAATAT GAGGCGCTCT ATACGGGTGG CACGAGTGCA GATCCACAGG ATCTACTCAA TTCAGATCTT TTCCCAGTTT TCAACGTGGG CAGAGGTGGT AAGTACACTT ATCATGGTCC TGGGCAACGT GTTATCTATC CAATACTTAA TCTAAGAAGC CGTAATATAT GTGATCTCCA TAAATATATT TATTTGTTGG AAGAAGTAGT AATTGTCACG CTCGATAATT TTGGGATTAA TGGCTGTAGA AAAGAGGGGC ATATTGGGGT CTGGGTTGGA ACGGGATGTC AGCCACCAAA AAAAATTGCG GCAATTGGTG TAAGAGTGAG TAAGTGGGTA AGTTATCATG GCATTGCTGT TAATTTGTAT CCAGATCTGA GCCACTATGA TGCGATAATT CCCTGCGGAA TTAAGAATTT TGGTGTAACT TCTGCAAAGG AAATGGGTAT AGAAATAAGG AGCTTTAATG CATTTGATAG ATACTTCAAA AAATCATTTG TGAAAATCTT TGGCGAATGA
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Protein sequence | MEWKIDKDCV DYQMSLMFMQ ERVKQVINGS GDELVWMLQY EALYTGGTSA DPQDLLNSDL FPVFNVGRGG KYTYHGPGQR VIYPILNLRS RNICDLHKYI YLLEEVVIVT LDNFGINGCR KEGHIGVWVG TGCQPPKKIA AIGVRVSKWV SYHGIAVNLY PDLSHYDAII PCGIKNFGVT SAKEMGIEIR SFNAFDRYFK KSFVKIFGE
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